RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 LY6KQ17RY6 165 aa13.1□□□□□ -0.31
PTPN11-205ENST00000635625 EAPPQ56P03 285 aaPredicted RBP13.1□□□□□ -0.31
PTPN11-205ENST00000635625 GKAP1Q5VSY0 366 aaPredicted RBP13.1□□□□□ -0.31
PTPN11-205ENST00000635625 DCUN1D2Q6PH85 259 aa13.1□□□□□ -0.31
PTPN11-205ENST00000635625 ZBTB33Q86T24 672 aa13.1□□□□□ -0.31
PTPN11-205ENST00000635625 ZC3H15Q8WU90 426 aaKnown RBP13.1□□□□□ -0.31
PTPN11-205ENST00000635625 CHMP6Q96FZ7 201 aa13.1□□□□□ -0.31
PTPN11-205ENST00000635625 FGD4Q96M96 766 aa13.1□□□□□ -0.31
PTPN11-205ENST00000635625 TTC25Q96NG3 672 aa13.1□□□□□ -0.31
PTPN11-205ENST00000635625 CCDC77Q9BR77 488 aa13.1□□□□□ -0.31
PTPN11-205ENST00000635625 NSRP1Q9H0G5 558 aaKnown RBP13.1□□□□□ -0.31
PTPN11-205ENST00000635625 VRTNQ9H8Y1 702 aa13.1□□□□□ -0.31
PTPN11-205ENST00000635625 ACTR5Q9H9F9 607 aaPredicted RBP13.1□□□□□ -0.31
PTPN11-205ENST00000635625 ELP3Q9H9T3 547 aa13.1□□□□□ -0.31
PTPN11-205ENST00000635625 PPANQ9NQ55 473 aaKnown RBP13.1□□□□□ -0.31
PTPN11-205ENST00000635625 ERAP1Q9NZ08 941 aa13.1□□□□□ -0.31
PTPN11-205ENST00000635625 FAM170AA1A519 330 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 KRT1P04264 644 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 WEE2P0C1S8 567 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 FGFR4P22455 802 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 TNFSF9P41273 254 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 ASPAP45381 313 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 ITGA8P53708 1063 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 SNX1Q13596 522 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 ACAP1Q15027 740 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 ERICH1Q86X53 443 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 CACNA2D3Q8IZS8 1091 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 MARVELD3Q96A59 401 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 SLITRK1Q96PX8 696 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 BCO2Q9BYV7 579 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 MIS12Q9H081 205 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 XYLT2Q9H1B5 865 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 RPF1Q9H9Y2 349 aaKnown RBP13.09□□□□□ -0.31
PTPN11-205ENST00000635625 CYP3A43Q9HB55 503 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 LGALS13Q9UHV8 139 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 PNMA3Q9UL41 463 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 ACTL7BQ9Y614 415 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 GLTPD2A6NH11 291 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 UNCXA6NJT0 531 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 TP73O15350 636 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 DDNO94850 711 aaPredicted RBP13.09□□□□□ -0.31
PTPN11-205ENST00000635625 FSBPO95073 299 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 ARIH2O95376 493 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 CALCAP01258 141 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 KRT7P08729 469 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 KLRC2P26717 231 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 LACTBP83111 547 aaPredicted RBP13.09□□□□□ -0.31
PTPN11-205ENST00000635625 TFAMQ00059 246 aaKnown RBP13.09□□□□□ -0.31
PTPN11-205ENST00000635625 MBTD1Q05BQ5 628 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 NR1H3Q13133 447 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 LAMC2Q13753 1193 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 AUHQ13825 339 aaKnown RBP13.09□□□□□ -0.31
PTPN11-205ENST00000635625 STAT4Q14765 748 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 ZNF667Q5HYK9 610 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 GPAT2Q6NUI2 795 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 C6orf89Q6UWU4 347 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 CCDC25Q86WR0 208 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 NT5DC4Q86YG4 428 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 RHPN2Q8IUC4 686 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 ZCCHC9Q8N567 271 aaKnown RBP13.09□□□□□ -0.31
PTPN11-205ENST00000635625 TTC13Q8NBP0 860 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 ELMO3Q96BJ8 720 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 FAM84AQ96KN4 292 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 ASB7Q9H672 318 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 AAASQ9NRG9 546 aa13.09□□□□□ -0.31
PTPN11-205ENST00000635625 DCDC2CA8MYV0 355 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 ADM5C9JUS6 153 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 SMAPO00193 183 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 TRIM66O15016 1216 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 LIASO43766 372 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 CST3P01034 146 aaPredicted RBP13.08□□□□□ -0.32
PTPN11-205ENST00000635625 CFHP08603 1231 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 SSR1P43307 286 aaKnown RBP13.08□□□□□ -0.32
PTPN11-205ENST00000635625 SEC24CP53992 1094 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 EMP3P54852 163 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 TMEM132AQ24JP5 1023 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 HSDL1Q3SXM5 330 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 TTC31Q49AM3 519 aaPredicted RBP13.08□□□□□ -0.32
PTPN11-205ENST00000635625 TFDP3Q5H9I0 405 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 SPOCD1Q6ZMY3 1216 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 ATG4AQ8WYN0 398 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 NKD2Q969F2 451 aaPredicted RBP13.08□□□□□ -0.32
PTPN11-205ENST00000635625 EMID1Q96A84 441 aaPredicted RBP13.08□□□□□ -0.32
PTPN11-205ENST00000635625 SELENOSQ9BQE4 189 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 CDT1Q9H211 546 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 VTA1Q9NP79 307 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 INTS9Q9NV88 658 aaKnown RBP13.08□□□□□ -0.32
PTPN11-205ENST00000635625 RBPJLQ9UBG7 517 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 USTQ9Y2C2 406 aa13.08□□□□□ -0.32
PTPN11-205ENST00000635625 TLDC2A0PJX2 215 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 SIGLEC16A6NMB1 481 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 INO80B-WBP1J3KQ70 363 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 C22orf31O95567 290 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 STAU1O95793 577 aaKnown RBP13.07□□□□□ -0.32
PTPN11-205ENST00000635625 ITGAVP06756 1048 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 TXNP10599 105 aaKnown RBP13.07□□□□□ -0.32
PTPN11-205ENST00000635625 CHN1P15882 459 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 BRD2P25440 801 aaKnown RBP13.07□□□□□ -0.32
PTPN11-205ENST00000635625 MARK3P27448 753 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 TMOD1P28289 359 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms