RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 TAF6P49848 677 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 SMC1AQ14683 1233 aaKnown RBP12.35□□□□□ -0.43
TP53-228ENST00000635293 CNGA2Q16280 664 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 MAP9Q49MG5 647 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 SEL1L2Q5TEA6 688 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 DNAJC24Q6P3W2 148 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 HDXQ7Z353 690 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 ERICH1Q86X53 443 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 TMEM130Q8N3G9 435 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 C3orf20Q8ND61 904 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.35□□□□□ -0.43
TP53-228ENST00000635293 ALG3Q92685 438 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 GLT1D1Q96MS3 346 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 TWNKQ96RR1 684 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 SEZ6LQ9BYH1 1024 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 MIS12Q9H081 205 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 CXCL16Q9H2A7 254 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 HMX1Q9NP08 348 aaPredicted RBP12.35□□□□□ -0.43
TP53-228ENST00000635293 GDAP2Q9NXN4 497 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 WDR35Q9P2L0 1181 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 CHORDC1Q9UHD1 332 aaPredicted RBP12.35□□□□□ -0.43
TP53-228ENST00000635293 L1RE1Q9UN81 338 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 NOD1Q9Y239 953 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 PCDHA3Q9Y5H8 950 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 GOLGA6L10A0A0M3HER8 536 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 TCRBV5S1A1TA0A578 114 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 O00370 1275 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 PPEF2O14830 753 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 CAPN15O75808 1086 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 ITGA4P13612 1032 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 TNFRSF8P28908 595 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 PEX5P50542 639 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 NDST1P52848 882 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 VSNL1P62760 191 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 PAK2Q13177 524 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 TRIM71Q2Q1W2 868 aaKnown RBP12.34□□□□□ -0.43
TP53-228ENST00000635293 DENND1BQ6P3S1 775 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 FEZF2Q8TBJ5 459 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 PPP1R10Q96QC0 940 aaKnown RBP12.34□□□□□ -0.43
TP53-228ENST00000635293 RNF39Q9H2S5 420 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 SLITRK6Q9H5Y7 841 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 ST7Q9NRC1 585 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 RNF216Q9NWF9 866 aaPredicted RBP12.34□□□□□ -0.43
TP53-228ENST00000635293 KLK14Q9P0G3 267 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 IP6K2Q9UHH9 426 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 GIT1Q9Y2X7 761 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 SNX9Q9Y5X1 595 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 PSTPIP1O43586 416 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 MICAL2O94851 1124 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 FAM163BP0C2L3 166 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 SETSIPP0DME0 302 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 GRK4P32298 578 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 SSTR3P32745 418 aaPredicted RBP12.34□□□□□ -0.43
TP53-228ENST00000635293 RWDD2BP57060 319 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 LCLAT1Q6UWP7 414 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 ZNF771Q7L3S4 317 aaPredicted RBP12.34□□□□□ -0.43
TP53-228ENST00000635293 MRPL10Q7Z7H8 261 aaKnown RBP12.34□□□□□ -0.43
TP53-228ENST00000635293 WDTC1Q8N5D0 677 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 ZNF784Q8NCA9 323 aaPredicted RBP12.34□□□□□ -0.43
TP53-228ENST00000635293 KRT35Q92764 455 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 BTBD6Q96KE9 485 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 HEXIM2Q96MH2 286 aaKnown RBP12.34□□□□□ -0.43
TP53-228ENST00000635293 STIM2Q9P246 746 aa12.34□□□□□ -0.43
TP53-228ENST00000635293 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.34□□□□□ -0.43
TP53-228ENST00000635293 TSC2P49815 1807 aa12.33□□□□□ -0.44
TP53-228ENST00000635293 A0A0U1RQG5 324 aaPredicted RBP12.33□□□□□ -0.44
TP53-228ENST00000635293 M0QYV0 167 aa12.33□□□□□ -0.44
TP53-228ENST00000635293 KRIT1O00522 736 aa12.33□□□□□ -0.44
TP53-228ENST00000635293 PTGESO14684 152 aa12.33□□□□□ -0.44
TP53-228ENST00000635293 ZNF623O75123 536 aa12.33□□□□□ -0.44
TP53-228ENST00000635293 FGGP02679 453 aa12.33□□□□□ -0.44
TP53-228ENST00000635293 SKIP12755 728 aa12.33□□□□□ -0.44
TP53-228ENST00000635293 MARCKSL1P49006 195 aa12.33□□□□□ -0.44
TP53-228ENST00000635293 NFX1Q12986 1120 aaKnown RBP12.33□□□□□ -0.44
TP53-228ENST00000635293 DSC3Q14574 896 aa12.33□□□□□ -0.44
TP53-228ENST00000635293 PTPN20Q4JDL3 420 aa12.33□□□□□ -0.44
TP53-228ENST00000635293 PPP1R15BQ5SWA1 713 aa12.33□□□□□ -0.44
TP53-228ENST00000635293 LIMS2Q7Z4I7 341 aa12.33□□□□□ -0.44
TP53-228ENST00000635293 SLC43A3Q8NBI5 491 aa12.33□□□□□ -0.44
TP53-228ENST00000635293 ARRDC4Q8NCT1 418 aa12.33□□□□□ -0.44
TP53-228ENST00000635293 IPO4Q8TEX9 1081 aaKnown RBP12.33□□□□□ -0.44
TP53-228ENST00000635293 ZNF296Q8WUU4 475 aaPredicted RBP12.33□□□□□ -0.44
TP53-228ENST00000635293 LRRC1Q9BTT6 524 aa12.33□□□□□ -0.44
TP53-228ENST00000635293 A0A1W2PQ45 241 aaPredicted RBP12.32□□□□□ -0.44
TP53-228ENST00000635293 A0A1W2PQY0 241 aa12.32□□□□□ -0.44
TP53-228ENST00000635293 TMEM191CA6NGB0 347 aa12.32□□□□□ -0.44
TP53-228ENST00000635293 KPNA7A9QM74 516 aa12.32□□□□□ -0.44
TP53-228ENST00000635293 GABRB2P47870 512 aa12.32□□□□□ -0.44
TP53-228ENST00000635293 SOX4Q06945 474 aaPredicted RBP12.32□□□□□ -0.44
TP53-228ENST00000635293 GPS2Q13227 327 aa12.32□□□□□ -0.44
TP53-228ENST00000635293 LPIN1Q14693 890 aa12.32□□□□□ -0.44
TP53-228ENST00000635293 ARHGAP17Q68EM7 881 aa12.32□□□□□ -0.44
TP53-228ENST00000635293 LHX8Q68G74 356 aa12.32□□□□□ -0.44
TP53-228ENST00000635293 DPH6Q7L8W6 267 aa12.32□□□□□ -0.44
TP53-228ENST00000635293 TOP6BLQ8N6T0 577 aa12.32□□□□□ -0.44
TP53-228ENST00000635293 NIPA2Q8N8Q9 360 aa12.32□□□□□ -0.44
TP53-228ENST00000635293 FNIP1Q8TF40 1166 aa12.32□□□□□ -0.44
TP53-228ENST00000635293 C18orf8Q96DM3 657 aa12.32□□□□□ -0.44
TP53-228ENST00000635293 KRT12Q99456 494 aa12.32□□□□□ -0.44
TP53-228ENST00000635293 MRPL45Q9BRJ2 306 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms