RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 GPIHBP1Q8IV16 184 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 KBTBD7Q8WVZ9 684 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 ARNTL2Q8WYA1 636 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 TSC1Q92574 1164 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 GUCD1Q96NT3 240 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 SAMD11Q96NU1 681 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 TTPALQ9BTX7 342 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 EDEM3Q9BZQ6 932 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 PRDM12Q9H4Q4 367 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 ALG13Q9NP73 1137 aaKnown RBP15.41■□□□□ 0.06
LINC00339-208ENST00000634934 PUF60Q9UHX1 559 aaKnown RBP15.41■□□□□ 0.06
LINC00339-208ENST00000634934 CAPN11Q9UMQ6 739 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 LUC7L2Q9Y383 392 aaKnown RBP15.41■□□□□ 0.06
LINC00339-208ENST00000634934 A0A1W2PQJ5 194 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 A8MXQ7 604 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 F8VZ95 297 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 RNF225M0QZC1 329 aaPredicted RBP15.4■□□□□ 0.06
LINC00339-208ENST00000634934 FOXN3O00409 490 aaPredicted RBP15.4■□□□□ 0.06
LINC00339-208ENST00000634934 SOD2P04179 222 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 CYP11A1P05108 521 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 RB1P06400 928 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 PDGFRBP09619 1106 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 ACO1P21399 889 aaKnown RBP15.4■□□□□ 0.06
LINC00339-208ENST00000634934 WARSP23381 471 aaKnown RBP15.4■□□□□ 0.06
LINC00339-208ENST00000634934 STAT1P42224 750 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 NDST1P52848 882 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 YWHAHQ04917 246 aaPredicted RBP15.4■□□□□ 0.06
LINC00339-208ENST00000634934 GABPB1Q06547 395 aaPredicted RBP15.4■□□□□ 0.06
LINC00339-208ENST00000634934 ORC1Q13415 861 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 VARS2Q5ST30 1063 aaKnown RBP15.4■□□□□ 0.06
LINC00339-208ENST00000634934 OSTM1Q86WC4 334 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 VPS52Q8N1B4 723 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 TTC39CQ8N584 583 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 FBXO22Q8NEZ5 403 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 SHC3Q92529 594 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 JAKMIP2Q96AA8 810 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 C11orf84Q9BUA3 381 aaPredicted RBP15.4■□□□□ 0.06
LINC00339-208ENST00000634934 MTMR10Q9NXD2 777 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 DDX43Q9NXZ2 648 aaKnown RBP15.4■□□□□ 0.06
LINC00339-208ENST00000634934 BARX2Q9UMQ3 279 aaPredicted RBP15.4■□□□□ 0.06
LINC00339-208ENST00000634934 COL6A3P12111 3177 aa15.4■□□□□ 0.06
LINC00339-208ENST00000634934 TMEM265A0A087WTH1 108 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 LRRC53A6NM62 1247 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 C2CD2LO14523 706 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 HCRTO43612 131 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 CILPO75339 1184 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 CSPG5O95196 566 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 EFEMP2O95967 443 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 FAM163BP0C2L3 166 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 CA8P35219 290 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 LHX1P48742 406 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 JAM2P57087 298 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 ZBED6P86452 979 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 GOLGA8FQ08AF8 430 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 GOLGA8DPQ0D2H9 430 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 INCA1Q0VD86 236 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 RTP2Q5QGT7 225 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 PDXDC1Q6P996 788 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 THEM5Q8N1Q8 247 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 UBR7Q8N806 425 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 RIN2Q8WYP3 895 aaPredicted RBP15.39■□□□□ 0.05
LINC00339-208ENST00000634934 BAP1Q92560 729 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 HERC2P3Q9BVR0 1158 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 GPR88Q9GZN0 384 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 STK39Q9UEW8 545 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 HMGXB4Q9UGU5 601 aa15.39■□□□□ 0.05
LINC00339-208ENST00000634934 AKR1B15C9JRZ8 316 aaPredicted RBP15.38■□□□□ 0.05
LINC00339-208ENST00000634934 C5orf67F2Z3F1 127 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 GABRDO14764 452 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 GFPT2O94808 682 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 ACAT1P24752 427 aaKnown RBP15.38■□□□□ 0.05
LINC00339-208ENST00000634934 LMO2P25791 158 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 KRT9P35527 623 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 SOX5P35711 763 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 GLUD2P49448 558 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 ADKP55263 362 aaKnown RBP15.38■□□□□ 0.05
LINC00339-208ENST00000634934 ARID5AQ03989 594 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 RNF168Q8IYW5 571 aaPredicted RBP15.38■□□□□ 0.05
LINC00339-208ENST00000634934 RBBP8NLQ8NC74 664 aaPredicted RBP15.38■□□□□ 0.05
LINC00339-208ENST00000634934 WHAMMQ8TF30 809 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 MYLIPQ8WY64 445 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 TWNKQ96RR1 684 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 CDX2Q99626 313 aaPredicted RBP15.38■□□□□ 0.05
LINC00339-208ENST00000634934 NT5C1AQ9BXI3 368 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 FAM124BQ9H5Z6 455 aaPredicted RBP15.38■□□□□ 0.05
LINC00339-208ENST00000634934 STXBP5LQ9Y2K9 1186 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 H7C4K7 107 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 CYP26A1O43174 497 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 OAZ2O95190 189 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 URODP06132 367 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 PCSK1P29120 753 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 GPM6BQ13491 265 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 CTXN3Q4LDR2 81 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 SFMBT2Q5VUG0 894 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 ZNF280DQ6N043 979 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 PRSS55Q6UWB4 352 aaPredicted RBP15.38■□□□□ 0.05
LINC00339-208ENST00000634934 ANKS3Q6ZW76 656 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 TMC7Q7Z402 723 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 ACOT1Q86TX2 421 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 UNC93AQ86WB7 457 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms