RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 SERPINB3P29508 390 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 GRK3P35626 688 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 FAM167BQ9BTA0 163 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 KIFC1Q9BW19 673 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 INO80Q9ULG1 1556 aaPredicted RBP13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 ASMTLO95671 621 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 IL6P05231 212 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 FGFR4P22455 802 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 ZNF200P98182 395 aaPredicted RBP13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 BYSLQ13895 437 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 PRPF39Q86UA1 669 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 LONP2Q86WA8 852 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 KATNAL1Q9BW62 490 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 SLC24A3Q9HC58 644 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 SASH1O94885 1247 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 FAM83BQ5T0W9 1011 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 JADE3Q92613 823 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 CCDC126Q96EE4 140 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 ZBTB12Q9Y330 459 aaPredicted RBP13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 PCDHB6Q9Y5E3 794 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 CPS1P31327 1500 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 KIF28PB7ZC32 967 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 USP17L15C9J2P7 530 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 USP17L13C9JLJ4 530 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 USP17L11C9JVI0 530 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 USP17L18D6R9N7 530 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 USP17L22D6RA61 530 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 USP17L17D6RBQ6 530 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 USP17L19D6RCP7 530 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 USP17L20D6RJB6 530 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 H7C1W4 665 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 RGS5O15539 181 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 USP17L24Q0WX57 530 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 MMGT1Q8N4V1 131 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 UTYO14607 1347 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 CYP2D7A0A087X1C5 515 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 ATP1A1P05023 1023 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 PCSK1P29120 753 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 ILF2Q12905 390 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 TMCC3Q9ULS5 477 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 C19orf81C9J6K1 198 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 GH2P01242 217 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 COX10Q12887 443 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 FAM83EQ2M2I3 478 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 TKFCQ3LXA3 575 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 AHI1Q8N157 1196 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 INTS2Q9H0H0 1204 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 CD209Q9NNX6 404 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 MINPP1Q9UNW1 487 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 ALDH6A1Q02252 535 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 TTLL9Q3SXZ7 439 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 STRIP1Q5VSL9 837 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 IRAK1BP1Q5VVH5 260 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 CDK5RAP1Q96SZ6 601 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 ACAD9Q9H845 621 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 CACNA2D2Q9NY47 1150 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 UBA2Q9UBT2 640 aaPredicted RBP13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 XPO7Q9UIA9 1087 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 SH3BP1Q9Y3L3 701 aa13.73□□□□□ -0.21
SYNGAP1-208ENST00000629380 KRT6BP04259 564 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 ALOX15P16050 662 aaPredicted RBP13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 KRT6CP48668 564 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 COPAP53621 1224 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 TSNQ15631 228 aaKnown RBP13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 UBE2SQ16763 222 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 PMF1Q6P1K2 205 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 AGO2Q9UKV8 859 aaKnown RBP13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 PIK3C2BO00750 1634 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 PVALEFA0A1B0GWK0 134 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 SLC16A4O15374 487 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 KRT74Q7RTS7 529 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 R3HDM1Q15032 1099 aaKnown RBP13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 PFKFB3Q16875 520 aaPredicted RBP13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 SLC20A1Q8WUM9 679 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 C18orf8Q96DM3 657 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 CCDC149Q6ZUS6 474 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 PGBD3Q8N328 593 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 APOL5Q9BWW9 433 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 OSBPL8Q9BZF1 889 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 STX7O15400 261 aaKnown RBP13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 PEX5P50542 639 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 ASZ1Q8WWH4 475 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 TUFT1Q9NNX1 390 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 CD4P01730 458 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 ACADSP16219 412 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 HNMTP50135 292 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 PTK7Q13308 1070 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 SKIV2LQ15477 1246 aaKnown RBP13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 MFSD4BQ5TF39 518 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 CLYBLQ8N0X4 340 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 DDHD1Q8NEL9 900 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 MADDQ8WXG6 1647 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 KANSL1LA0AUZ9 987 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 TM9SF1O15321 606 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 SOAT2O75908 522 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 TGFBR2P37173 567 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 NFX1Q12986 1120 aaKnown RBP13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 TRIQKQ629K1 86 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 CDC73Q6P1J9 531 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms