RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 DNAJB5O75953 348 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 ATXN1LP0C7T5 689 aaKnown RBP3.83□□□□□ -1.8
CNOT1-223ENST00000628857 PIM1P11309 404 aaPredicted RBP3.83□□□□□ -1.8
CNOT1-223ENST00000628857 ITGALP20701 1170 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 NPTX2P47972 431 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 SOX10P56693 466 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 PSMC1P62191 440 aaKnown RBP3.83□□□□□ -1.8
CNOT1-223ENST00000628857 TUBB3Q13509 450 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 GBX1Q14549 363 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 MLC1Q15049 377 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 GFOD2Q3B7J2 385 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 CRB2Q5IJ48 1285 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 NPNTQ6UXI9 565 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 MAEAQ7L5Y9 396 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 OVCH2Q7RTZ1 564 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 RAVER1Q8IY67 606 aaKnown RBP3.83□□□□□ -1.8
CNOT1-223ENST00000628857 SH2D3CQ8N5H7 860 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 SSH3Q8TE77 659 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 ANKS1AQ92625 1134 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 NAP1L5Q96NT1 182 aaPredicted RBP3.83□□□□□ -1.8
CNOT1-223ENST00000628857 ALG8Q9BVK2 526 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 SPATA5L1Q9BVQ7 753 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 AMBRA1Q9C0C7 1298 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 FAM204AQ9H8W3 233 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 SYNPO2LQ9H987 977 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 PRDM11Q9NQV5 511 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 KLC4Q9NSK0 619 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 FOXJ2Q9P0K8 574 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 AGAP1Q9UPQ3 857 aa3.83□□□□□ -1.8
CNOT1-223ENST00000628857 CAPN8A6NHC0 703 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 ZAR1LA6NP61 321 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 ISM1B1AKI9 464 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 F5H697 171 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 ORC4O43929 436 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 KIF20AO95235 890 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 AHSGP02765 367 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 RPL17P18621 184 aaKnown RBP3.82□□□□□ -1.8
CNOT1-223ENST00000628857 HDCP19113 662 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 GCLCP48506 637 aaPredicted RBP3.82□□□□□ -1.8
CNOT1-223ENST00000628857 NDUFV1P49821 464 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 CACNB3P54284 484 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 MRPS35P82673 323 aaKnown RBP3.82□□□□□ -1.8
CNOT1-223ENST00000628857 EXOSC9Q06265 439 aaKnown RBP3.82□□□□□ -1.8
CNOT1-223ENST00000628857 IQCB1Q15051 598 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 SF3B3Q15393 1217 aaKnown RBP3.82□□□□□ -1.8
CNOT1-223ENST00000628857 CD300EQ496F6 205 aaPredicted RBP3.82□□□□□ -1.8
CNOT1-223ENST00000628857 PREPLQ4J6C6 727 aaPredicted RBP3.82□□□□□ -1.8
CNOT1-223ENST00000628857 TAF2Q6P1X5 1199 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 DTX2Q86UW9 622 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 PRIMA1Q86XR5 153 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 ZBTB34Q8NCN2 500 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 PSD4Q8NDX1 1056 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 TMEM125Q96AQ2 219 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 CCDC136Q96JN2 1154 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 TIMP4Q99727 224 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 TRIM54Q9BYV2 358 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 LRIT1Q9P2V4 623 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 C11orf21Q9P2W6 132 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 HESX1Q9UBX0 185 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 PCDHA6Q9UN73 950 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 INSL6Q9Y581 213 aa3.82□□□□□ -1.8
CNOT1-223ENST00000628857 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 A0A0U1RQG5 324 aaPredicted RBP3.81□□□□□ -1.8
CNOT1-223ENST00000628857 A0A1W2PPL8 197 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 PPM1GO15355 546 aaPredicted RBP3.81□□□□□ -1.8
CNOT1-223ENST00000628857 PRPF3O43395 683 aaKnown RBP3.81□□□□□ -1.8
CNOT1-223ENST00000628857 PROP1O75360 226 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 ZBED1O96006 694 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 WT1P19544 449 aaPredicted RBP3.81□□□□□ -1.8
CNOT1-223ENST00000628857 EN2P19622 333 aaPredicted RBP3.81□□□□□ -1.8
CNOT1-223ENST00000628857 PPIFP30405 207 aaKnown RBP3.81□□□□□ -1.8
CNOT1-223ENST00000628857 LRPAP1P30533 357 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 CXCR5P32302 372 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 KCNJ5P48544 419 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 CACNA2D1P54289 1103 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 ELLP55199 621 aaPredicted RBP3.81□□□□□ -1.8
CNOT1-223ENST00000628857 LOXL3P58215 753 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 SATB1Q01826 763 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 FSTL1Q12841 308 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 HLTFQ14527 1009 aaKnown RBP eCLIP3.81□□□□□ -1.8
CNOT1-223ENST00000628857 LRRC41Q15345 812 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 LONRF3Q496Y0 759 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 TEDDM1Q5T9Z0 273 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 GRASPQ7Z6J2 395 aaPredicted RBP3.81□□□□□ -1.8
CNOT1-223ENST00000628857 GAS2L3Q86XJ1 694 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 SIMC1Q8NDZ2 872 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 NSUN7Q8NE18 718 aaKnown RBP3.81□□□□□ -1.8
CNOT1-223ENST00000628857 GPR150Q8NGU9 434 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 OR6B3Q8NGW1 331 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 IL31RAQ8NI17 732 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 SLC30A5Q8TAD4 765 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 TTC8Q8TAM2 541 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 PPP1R35Q8TAP8 253 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 NELL1Q92832 810 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 LRGUKQ96M69 825 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 PTDSS2Q9BVG9 487 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 SLAMF7Q9NQ25 335 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 SLC17A6Q9P2U8 582 aa3.81□□□□□ -1.8
CNOT1-223ENST00000628857 SH2B3Q9UQQ2 575 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms