RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 PCDHB5Q9Y5E4 795 aa17.1■□□□□ 0.33
CHRNA4-211ENST00000628606 WDFY4Q6ZS81 3184 aa17.1■□□□□ 0.33
CHRNA4-211ENST00000628606 PHACTR2O75167 634 aa17.09■□□□□ 0.33
CHRNA4-211ENST00000628606 ZNF202O95125 648 aa17.09■□□□□ 0.33
CHRNA4-211ENST00000628606 EPHA5P54756 1037 aa17.09■□□□□ 0.33
CHRNA4-211ENST00000628606 TRPC3Q13507 836 aa17.09■□□□□ 0.33
CHRNA4-211ENST00000628606 KRBA2Q6ZNG9 492 aa17.09■□□□□ 0.33
CHRNA4-211ENST00000628606 DPH6Q7L8W6 267 aa17.09■□□□□ 0.33
CHRNA4-211ENST00000628606 TRAPPC11Q7Z392 1133 aa17.09■□□□□ 0.33
CHRNA4-211ENST00000628606 DNAJB7Q7Z6W7 309 aaPredicted RBP17.09■□□□□ 0.33
CHRNA4-211ENST00000628606 ADGRF2Q8IZF7 708 aa17.09■□□□□ 0.33
CHRNA4-211ENST00000628606 KIAA0895Q8NCT3 520 aa17.09■□□□□ 0.33
CHRNA4-211ENST00000628606 PSMG2Q969U7 264 aa17.09■□□□□ 0.33
CHRNA4-211ENST00000628606 ELSPBP1Q96BH3 223 aa17.09■□□□□ 0.33
CHRNA4-211ENST00000628606 FAM84AQ96KN4 292 aa17.09■□□□□ 0.33
CHRNA4-211ENST00000628606 GCNAQ96QF7 691 aa17.09■□□□□ 0.33
CHRNA4-211ENST00000628606 MMS19Q96T76 1030 aa17.09■□□□□ 0.33
CHRNA4-211ENST00000628606 ARHGEF3Q9NR81 526 aa17.09■□□□□ 0.33
CHRNA4-211ENST00000628606 KMT2EQ8IZD2 1858 aa17.09■□□□□ 0.33
CHRNA4-211ENST00000628606 PDXKO00764 312 aa17.08■□□□□ 0.32
CHRNA4-211ENST00000628606 CALUO43852 315 aaPredicted RBP17.08■□□□□ 0.32
CHRNA4-211ENST00000628606 SOAT2O75908 522 aa17.08■□□□□ 0.32
CHRNA4-211ENST00000628606 CLSTN1O94985 981 aa17.08■□□□□ 0.32
CHRNA4-211ENST00000628606 GJA1P17302 382 aa17.08■□□□□ 0.32
CHRNA4-211ENST00000628606 AOC1P19801 751 aa17.08■□□□□ 0.32
CHRNA4-211ENST00000628606 CCR2P41597 374 aa17.08■□□□□ 0.32
CHRNA4-211ENST00000628606 CDR1P51861 262 aa17.08■□□□□ 0.32
CHRNA4-211ENST00000628606 ARHGAP15Q53QZ3 475 aa17.08■□□□□ 0.32
CHRNA4-211ENST00000628606 LRRTM3Q86VH5 581 aa17.08■□□□□ 0.32
CHRNA4-211ENST00000628606 TTC9BQ8N6N2 239 aa17.08■□□□□ 0.32
CHRNA4-211ENST00000628606 CXorf38Q8TB03 319 aa17.08■□□□□ 0.32
CHRNA4-211ENST00000628606 SMARCD2Q92925 531 aa17.08■□□□□ 0.32
CHRNA4-211ENST00000628606 DNAJC25Q9H1X3 360 aa17.08■□□□□ 0.32
CHRNA4-211ENST00000628606 ATXN3LQ9H3M9 355 aa17.08■□□□□ 0.32
CHRNA4-211ENST00000628606 PTPRJQ12913 1337 aa17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 A0A1W2PRU2 124 aa17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 KRBA1A5PL33 1030 aa17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 HAPLN1P10915 354 aaPredicted RBP17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 AP3M2P53677 418 aa17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 NHLH1Q02575 133 aa17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 TEAD2Q15562 447 aa17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 INTS6LQ5JSJ4 861 aaKnown RBP17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 FAM78AQ5JUQ0 283 aa17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 TANGO2Q6ICL3 276 aa17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 TMEM105Q8N8V8 129 aa17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 PRSS33Q8NF86 280 aa17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 E2F7Q96AV8 911 aa17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 ASB16Q96NS5 453 aa17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 PI4K2AQ9BTU6 479 aa17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 GOLPH3LQ9H4A5 285 aa17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 TBC1D17Q9HA65 648 aa17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 FRMD4BQ9Y2L6 1034 aa17.07■□□□□ 0.32
CHRNA4-211ENST00000628606 GALR2O43603 387 aaPredicted RBP17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 RHOBTB3O94955 611 aa17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 NPR3P17342 541 aa17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 ACAT1P24752 427 aaKnown RBP17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 GABRR2P28476 465 aa17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 CDC25CP30307 473 aa17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 RPL10AP62906 217 aaKnown RBP17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 TNNC1P63316 161 aa17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 DPYDQ12882 1025 aa17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 BIRC3Q13489 604 aa17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 SOWAHAQ2M3V2 549 aa17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 SLC44A4Q53GD3 710 aa17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 CWF19L1Q69YN2 538 aaKnown RBP17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 PHLDB3Q6NSJ2 640 aa17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 SPATA2LQ8IUW3 424 aaPredicted RBP17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 SLC9A9Q8IVB4 645 aa17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 SHKBP1Q8TBC3 707 aa17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 ZSCAN18Q8TBC5 510 aaPredicted RBP17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 GIPC2Q8TF65 315 aa17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 LPIN3Q9BQK8 851 aa17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 TRMT61BQ9BVS5 477 aaKnown RBP17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 SNX25Q9H3E2 840 aa17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 BRD9Q9H8M2 597 aa17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 GTF3C4Q9UKN8 822 aa17.06■□□□□ 0.32
CHRNA4-211ENST00000628606 DPYSL4O14531 572 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 GABRDO14764 452 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 MOSPD3O75425 235 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 CST3P01034 146 aaPredicted RBP17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 NR3C1P04150 777 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 PRR29P0C7W0 189 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 ATICP31939 592 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 PRKCQQ04759 706 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 SNW1Q13573 536 aaKnown RBP17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 KCNB1Q14721 858 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 MAPRE1Q15691 268 aaKnown RBP17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 MLF2Q15773 248 aaPredicted RBP17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 WDR72Q3MJ13 1102 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 CEP135Q66GS9 1140 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 SCARA3Q6AZY7 606 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 C4orf50Q6ZRC1 276 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 TMC8Q8IU68 726 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 YAF2Q8IY57 180 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 DEPDC1BQ8WUY9 529 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 SYAP1Q96A49 352 aaPredicted RBP17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 ZSWIM3Q96MP5 696 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 LRRC3Q9BY71 257 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 KCTD10Q9H3F6 313 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 ABCB6Q9NP58 842 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms