RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 NUMBLQ9Y6R0 609 aa24■■□□□ 1.43
SF1-220ENST00000626028 RPL13P26373 211 aaKnown RBP23.99■■□□□ 1.43
SF1-220ENST00000626028 VEPH1Q14D04 833 aa23.99■■□□□ 1.43
SF1-220ENST00000626028 SOWAHAQ2M3V2 549 aa23.99■■□□□ 1.43
SF1-220ENST00000626028 ADGRF2Q8IZF7 708 aa23.99■■□□□ 1.43
SF1-220ENST00000626028 PSMG2Q969U7 264 aa23.99■■□□□ 1.43
SF1-220ENST00000626028 DDX43Q9NXZ2 648 aaKnown RBP23.99■■□□□ 1.43
SF1-220ENST00000626028 GREB1Q4ZG55 1949 aa23.99■■□□□ 1.43
SF1-220ENST00000626028 ZNF638Q14966 1978 aaKnown RBP23.99■■□□□ 1.43
SF1-220ENST00000626028 MUC6Q6W4X9 2439 aa23.99■■□□□ 1.43
SF1-220ENST00000626028 OBSL1O75147 1896 aa23.98■■□□□ 1.43
SF1-220ENST00000626028 IKBKBO14920 756 aa23.98■■□□□ 1.43
SF1-220ENST00000626028 ECI2O75521 394 aa23.98■■□□□ 1.43
SF1-220ENST00000626028 LRRTM3Q86VH5 581 aa23.98■■□□□ 1.43
SF1-220ENST00000626028 TMC2Q8TDI7 906 aa23.98■■□□□ 1.43
SF1-220ENST00000626028 RSAD2Q8WXG1 361 aa23.98■■□□□ 1.43
SF1-220ENST00000626028 FGF14Q92915 247 aa23.98■■□□□ 1.43
SF1-220ENST00000626028 SYAP1Q96A49 352 aaPredicted RBP23.98■■□□□ 1.43
SF1-220ENST00000626028 GZF1Q9H116 711 aaPredicted RBP23.98■■□□□ 1.43
SF1-220ENST00000626028 DNAJC25Q9H1X3 360 aa23.98■■□□□ 1.43
SF1-220ENST00000626028 VRTNQ9H8Y1 702 aa23.98■■□□□ 1.43
SF1-220ENST00000626028 SLC27A5Q9Y2P5 690 aa23.98■■□□□ 1.43
SF1-220ENST00000626028 PCDHB5Q9Y5E4 795 aa23.98■■□□□ 1.43
SF1-220ENST00000626028 WDFY4Q6ZS81 3184 aa23.97■■□□□ 1.43
SF1-220ENST00000626028 SMC2O95347 1197 aa23.97■■□□□ 1.43
SF1-220ENST00000626028 CLCN5P51795 746 aa23.97■■□□□ 1.43
SF1-220ENST00000626028 MAPRE1Q15691 268 aaKnown RBP23.97■■□□□ 1.43
SF1-220ENST00000626028 COBLL1Q53SF7 1204 aa23.97■■□□□ 1.43
SF1-220ENST00000626028 INTS6LQ5JSJ4 861 aaKnown RBP23.97■■□□□ 1.43
SF1-220ENST00000626028 PARM1Q6UWI2 310 aa23.97■■□□□ 1.43
SF1-220ENST00000626028 SPATA20Q8TB22 786 aa23.97■■□□□ 1.43
SF1-220ENST00000626028 FUBP3Q96I24 572 aaKnown RBP eCLIP23.97■■□□□ 1.43
SF1-220ENST00000626028 LRRC3Q9BY71 257 aa23.97■■□□□ 1.43
SF1-220ENST00000626028 SMOC2Q9H3U7 446 aa23.97■■□□□ 1.43
SF1-220ENST00000626028 FBXL21Q9UKT6 434 aa23.97■■□□□ 1.43
SF1-220ENST00000626028 TACC1O75410 805 aa23.96■■□□□ 1.43
SF1-220ENST00000626028 HAPLN1P10915 354 aaPredicted RBP23.96■■□□□ 1.43
SF1-220ENST00000626028 CEBPBP17676 345 aa23.96■■□□□ 1.43
SF1-220ENST00000626028 TRPC3Q13507 836 aa23.96■■□□□ 1.43
SF1-220ENST00000626028 EDRF1Q3B7T1 1238 aa23.96■■□□□ 1.43
SF1-220ENST00000626028 MGAT5BQ3V5L5 792 aa23.96■■□□□ 1.43
SF1-220ENST00000626028 DNAJB7Q7Z6W7 309 aaPredicted RBP23.96■■□□□ 1.43
SF1-220ENST00000626028 ING5Q8WYH8 240 aa23.96■■□□□ 1.43
SF1-220ENST00000626028 ZNF516Q92618 1163 aa23.96■■□□□ 1.43
SF1-220ENST00000626028 ELSPBP1Q96BH3 223 aa23.96■■□□□ 1.43
SF1-220ENST00000626028 PKMYT1Q99640 499 aa23.96■■□□□ 1.43
SF1-220ENST00000626028 ZMYM5Q9UJ78 669 aa23.96■■□□□ 1.43
SF1-220ENST00000626028 CDH9Q9ULB4 789 aa23.96■■□□□ 1.43
SF1-220ENST00000626028 CST3P01034 146 aaPredicted RBP23.95■■□□□ 1.42
SF1-220ENST00000626028 WARSP23381 471 aaKnown RBP23.95■■□□□ 1.42
SF1-220ENST00000626028 NR2F2P24468 414 aa23.95■■□□□ 1.42
SF1-220ENST00000626028 CCR2P41597 374 aa23.95■■□□□ 1.42
SF1-220ENST00000626028 PFKPQ01813 784 aa23.95■■□□□ 1.42
SF1-220ENST00000626028 CFAP221Q4G0U5 840 aa23.95■■□□□ 1.42
SF1-220ENST00000626028 SCARA3Q6AZY7 606 aa23.95■■□□□ 1.42
SF1-220ENST00000626028 TMC8Q8IU68 726 aa23.95■■□□□ 1.42
SF1-220ENST00000626028 TTC9BQ8N6N2 239 aa23.95■■□□□ 1.42
SF1-220ENST00000626028 E2F7Q96AV8 911 aa23.95■■□□□ 1.42
SF1-220ENST00000626028 MCRS1Q96EZ8 462 aa23.95■■□□□ 1.42
SF1-220ENST00000626028 FAM84AQ96KN4 292 aa23.95■■□□□ 1.42
SF1-220ENST00000626028 CEP295NLQ96MC4 621 aa23.95■■□□□ 1.42
SF1-220ENST00000626028 SEPT5Q99719 369 aaPredicted RBP23.95■■□□□ 1.42
SF1-220ENST00000626028 MFSD1Q9H3U5 465 aa23.95■■□□□ 1.42
SF1-220ENST00000626028 TRPV4Q9HBA0 871 aa23.95■■□□□ 1.42
SF1-220ENST00000626028 ABI2Q9NYB9 513 aaPredicted RBP23.95■■□□□ 1.42
SF1-220ENST00000626028 MIA3Q5JRA6 1907 aa23.94■■□□□ 1.42
SF1-220ENST00000626028 PHACTR2O75167 634 aa23.94■■□□□ 1.42
SF1-220ENST00000626028 MYL4P12829 197 aa23.94■■□□□ 1.42
SF1-220ENST00000626028 MCCD1P59942 119 aaPredicted RBP23.94■■□□□ 1.42
SF1-220ENST00000626028 TNNC1P63316 161 aa23.94■■□□□ 1.42
SF1-220ENST00000626028 WDR72Q3MJ13 1102 aa23.94■■□□□ 1.42
SF1-220ENST00000626028 ZNF658Q5TYW1 1059 aaPredicted RBP23.94■■□□□ 1.42
SF1-220ENST00000626028 CEP135Q66GS9 1140 aa23.94■■□□□ 1.42
SF1-220ENST00000626028 FAM171BQ6P995 826 aa23.94■■□□□ 1.42
SF1-220ENST00000626028 C4orf50Q6ZRC1 276 aa23.94■■□□□ 1.42
SF1-220ENST00000626028 INTS8Q75QN2 995 aaKnown RBP23.94■■□□□ 1.42
SF1-220ENST00000626028 HS6ST3Q8IZP7 471 aa23.94■■□□□ 1.42
SF1-220ENST00000626028 KBTBD7Q8WVZ9 684 aa23.94■■□□□ 1.42
SF1-220ENST00000626028 TCEAL4Q96EI5 215 aa23.94■■□□□ 1.42
SF1-220ENST00000626028 ASB16Q96NS5 453 aa23.94■■□□□ 1.42
SF1-220ENST00000626028 MMS19Q96T76 1030 aa23.94■■□□□ 1.42
SF1-220ENST00000626028 XYLT2Q9H1B5 865 aa23.94■■□□□ 1.42
SF1-220ENST00000626028 ZFP14Q9HCL3 533 aa23.94■■□□□ 1.42
SF1-220ENST00000626028 LRRIQ3A6PVS8 624 aaPredicted RBP23.93■■□□□ 1.42
SF1-220ENST00000626028 SOBPA7XYQ1 873 aa23.93■■□□□ 1.42
SF1-220ENST00000626028 NARSO43776 548 aaKnown RBP23.93■■□□□ 1.42
SF1-220ENST00000626028 MOSPD3O75425 235 aa23.93■■□□□ 1.42
SF1-220ENST00000626028 C4BPAP04003 597 aaKnown RBP23.93■■□□□ 1.42
SF1-220ENST00000626028 ATF6P18850 670 aa23.93■■□□□ 1.42
SF1-220ENST00000626028 AVPR2P30518 371 aa23.93■■□□□ 1.42
SF1-220ENST00000626028 RPL10AP62906 217 aaKnown RBP23.93■■□□□ 1.42
SF1-220ENST00000626028 PNOCQ13519 176 aa23.93■■□□□ 1.42
SF1-220ENST00000626028 ZACNQ401N2 412 aa23.93■■□□□ 1.42
SF1-220ENST00000626028 ZCWPW2Q504Y3 356 aa23.93■■□□□ 1.42
SF1-220ENST00000626028 TDRD10Q5VZ19 366 aaKnown RBP23.93■■□□□ 1.42
SF1-220ENST00000626028 ASTLQ6HA08 431 aaPredicted RBP23.93■■□□□ 1.42
SF1-220ENST00000626028 PLEKHO2Q8TD55 490 aa23.93■■□□□ 1.42
SF1-220ENST00000626028 TAF4BQ92750 862 aa23.93■■□□□ 1.42
SF1-220ENST00000626028 SMARCD2Q92925 531 aa23.93■■□□□ 1.42
SF1-220ENST00000626028 WEE1P30291 646 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms