RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 CCDC192P0DO97 292 aa15□□□□□ -0.01
SNRPA1-216ENST00000626000 MXI1P50539 228 aa15□□□□□ -0.01
SNRPA1-216ENST00000626000 EPHB3P54753 998 aa15□□□□□ -0.01
SNRPA1-216ENST00000626000 MYL6P60660 151 aa15□□□□□ -0.01
SNRPA1-216ENST00000626000 VEPH1Q14D04 833 aa15□□□□□ -0.01
SNRPA1-216ENST00000626000 SOWAHAQ2M3V2 549 aa15□□□□□ -0.01
SNRPA1-216ENST00000626000 INTS6LQ5JSJ4 861 aaKnown RBP15□□□□□ -0.01
SNRPA1-216ENST00000626000 KLHL10Q6JEL2 608 aa15□□□□□ -0.01
SNRPA1-216ENST00000626000 TTI2Q6NXR4 508 aa15□□□□□ -0.01
SNRPA1-216ENST00000626000 C4orf50Q6ZRC1 276 aa15□□□□□ -0.01
SNRPA1-216ENST00000626000 ZDHHC14Q8IZN3 488 aa15□□□□□ -0.01
SNRPA1-216ENST00000626000 CEP295NLQ96MC4 621 aa15□□□□□ -0.01
SNRPA1-216ENST00000626000 ZNF512Q96ME7 567 aaPredicted RBP15□□□□□ -0.01
SNRPA1-216ENST00000626000 XYLT2Q9H1B5 865 aa15□□□□□ -0.01
SNRPA1-216ENST00000626000 SNX25Q9H3E2 840 aa15□□□□□ -0.01
SNRPA1-216ENST00000626000 CDH9Q9ULB4 789 aa15□□□□□ -0.01
SNRPA1-216ENST00000626000 PCDHB5Q9Y5E4 795 aa15□□□□□ -0.01
SNRPA1-216ENST00000626000 MTMR11A4FU01 709 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 MICAL2O94851 1124 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 ASS1P00966 412 aaKnown RBP14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 CST3P01034 146 aaPredicted RBP14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 ALADP13716 330 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 PTPN2P17706 415 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 BMP6P22004 513 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 DLG4P78352 724 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 CCDC40Q4G0X9 1142 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 TCERG1LQ5VWI1 586 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 ISM2Q6H9L7 571 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 RNF19BQ6ZMZ0 732 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 FBXL13Q8NEE6 735 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 OR10T2Q8NGX3 314 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 PLEKHO2Q8TD55 490 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 NXPE3Q969Y0 559 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 RPGRIP1Q96KN7 1286 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 TNIP3Q96KP6 325 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 POLIQ9UNA4 740 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 CTNND2Q9UQB3 1225 aa14.99□□□□□ -0.01
SNRPA1-216ENST00000626000 C2orf16Q68DN1 1984 aa14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 ATP8B3O60423 1300 aa14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 TRIM49BA6NDI0 452 aa14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 PMM2O15305 246 aa14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 P4HA2O15460 535 aa14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 CD44P16070 742 aaKnown RBP14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 FSHRP23945 695 aa14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 ERCC5P28715 1186 aaPredicted RBP14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 GNL1P36915 607 aaPredicted RBP14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 PMS1P54277 932 aaKnown RBP14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 MARSP56192 900 aaKnown RBP14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 RPL10AP62906 217 aaKnown RBP14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 CFAP221Q4G0U5 840 aa14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 PABPC1LQ4VXU2 614 aaKnown RBP14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 SLC39A12Q504Y0 691 aa14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 DCAF17Q5H9S7 520 aaPredicted RBP14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 WDR44Q5JSH3 913 aa14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 CYP4A22Q5TCH4 519 aa14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 FAM114A1Q8IWE2 563 aa14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 CYP3A43Q9HB55 503 aa14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 EHD2Q9NZN4 543 aa14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 NXF1Q9UBU9 619 aaKnown RBP14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 ZMYM5Q9UJ78 669 aa14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 YIPF1Q9Y548 306 aa14.98□□□□□ -0.01
SNRPA1-216ENST00000626000 CCL16O15467 120 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 HLA-DRAP01903 254 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 TRIM49P0CI25 452 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 TRIM49CP0CI26 452 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 GCLMP48507 274 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 NLRP12P59046 1061 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 NOP14P78316 857 aaKnown RBP14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 DUSP4Q13115 394 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 TPD52L1Q16890 204 aaPredicted RBP14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 VSTM1Q6UX27 236 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 UNC93AQ86WB7 457 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 SPATA2LQ8IUW3 424 aaPredicted RBP14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 TMEM130Q8N3G9 435 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 OR6B3Q8NGW1 331 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 PGLYRP2Q96PD5 576 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 RTP3Q9BQQ7 232 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 SYT15Q9BQS2 421 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 GPR88Q9GZN0 384 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 NIF3L1Q9GZT8 377 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 ASAH2Q9NR71 780 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 IGSF9Q9P2J2 1179 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 COQ4Q9Y3A0 265 aa14.97□□□□□ -0.01
SNRPA1-216ENST00000626000 A8MXQ7 604 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 SEC24AO95486 1093 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 VNN1O95497 513 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 OR4Q2P0C623 313 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 MAGEA11P43364 429 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 YWHAEP62258 255 aaKnown RBP14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 PPP3CAQ08209 521 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 TWF1Q12792 350 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 TAF12Q16514 161 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 MGAT5BQ3V5L5 792 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 C1orf220Q5T0J3 134 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 CCDC183Q5T5S1 534 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 SMYD5Q6GMV2 418 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 FAM171BQ6P995 826 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 RBM43Q6ZSC3 357 aaKnown RBP14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 PDZD4Q76G19 769 aaPredicted RBP14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 GRASPQ7Z6J2 395 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms