RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 PTPRDP23468 1912 aa17.71■□□□□ 0.43
CCNA1-203ENST00000625767 ADAM12O43184 909 aa17.71■□□□□ 0.42
CCNA1-203ENST00000625767 CFHP08603 1231 aa17.71■□□□□ 0.42
CCNA1-203ENST00000625767 STAT1P42224 750 aa17.71■□□□□ 0.42
CCNA1-203ENST00000625767 ERVFC1P60507 584 aa17.71■□□□□ 0.42
CCNA1-203ENST00000625767 MRPL58Q14197 206 aaKnown RBP17.71■□□□□ 0.42
CCNA1-203ENST00000625767 USP41Q3LFD5 358 aa17.71■□□□□ 0.42
CCNA1-203ENST00000625767 GLYCTKQ8IVS8 523 aa17.71■□□□□ 0.42
CCNA1-203ENST00000625767 TMEM86AQ8N2M4 240 aa17.71■□□□□ 0.42
CCNA1-203ENST00000625767 LNX1Q8TBB1 728 aaPredicted RBP17.71■□□□□ 0.42
CCNA1-203ENST00000625767 SPPL3Q8TCT6 385 aa17.71■□□□□ 0.42
CCNA1-203ENST00000625767 ARNTL2Q8WYA1 636 aa17.71■□□□□ 0.42
CCNA1-203ENST00000625767 RIN2Q8WYP3 895 aaPredicted RBP17.71■□□□□ 0.42
CCNA1-203ENST00000625767 ANP32BQ92688 251 aaKnown RBP17.71■□□□□ 0.42
CCNA1-203ENST00000625767 DNAJC7Q99615 494 aa17.71■□□□□ 0.42
CCNA1-203ENST00000625767 HERC2P3Q9BVR0 1158 aa17.71■□□□□ 0.42
CCNA1-203ENST00000625767 EDEM3Q9BZQ6 932 aa17.71■□□□□ 0.42
CCNA1-203ENST00000625767 C5orf67F2Z3F1 127 aa17.7■□□□□ 0.42
CCNA1-203ENST00000625767 RFXAPO00287 272 aa17.7■□□□□ 0.42
CCNA1-203ENST00000625767 PLEKP08567 350 aaPredicted RBP17.7■□□□□ 0.42
CCNA1-203ENST00000625767 ELAVL2Q12926 359 aaKnown RBP17.7■□□□□ 0.42
CCNA1-203ENST00000625767 CAMK1Q14012 370 aa17.7■□□□□ 0.42
CCNA1-203ENST00000625767 LRRTM3Q86VH5 581 aa17.7■□□□□ 0.42
CCNA1-203ENST00000625767 METTL23Q86XA0 190 aa17.7■□□□□ 0.42
CCNA1-203ENST00000625767 SLC20A1Q8WUM9 679 aa17.7■□□□□ 0.42
CCNA1-203ENST00000625767 POF1BQ8WVV4 589 aa17.7■□□□□ 0.42
CCNA1-203ENST00000625767 TFAP2BQ92481 460 aa17.7■□□□□ 0.42
CCNA1-203ENST00000625767 JAKMIP2Q96AA8 810 aa17.7■□□□□ 0.42
CCNA1-203ENST00000625767 TIFAQ96CG3 184 aa17.7■□□□□ 0.42
CCNA1-203ENST00000625767 ZBP1Q9H171 429 aa17.7■□□□□ 0.42
CCNA1-203ENST00000625767 SLC28A3Q9HAS3 691 aa17.7■□□□□ 0.42
CCNA1-203ENST00000625767 CRTAC1Q9NQ79 661 aa17.7■□□□□ 0.42
CCNA1-203ENST00000625767 FAM49BQ9NUQ9 324 aa17.7■□□□□ 0.42
CCNA1-203ENST00000625767 TMLHEQ9NVH6 421 aa17.7■□□□□ 0.42
CCNA1-203ENST00000625767 IMPACTQ9P2X3 320 aa17.7■□□□□ 0.42
CCNA1-203ENST00000625767 MYBPHLA2RUH7 354 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 OAZ2O95190 189 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 PAX3P23760 479 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 BRD2P25440 801 aaKnown RBP17.69■□□□□ 0.42
CCNA1-203ENST00000625767 IRS1P35568 1242 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 SMAD3P84022 425 aaKnown RBP17.69■□□□□ 0.42
CCNA1-203ENST00000625767 KRT17Q04695 432 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 SFMBT2Q5VUG0 894 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 HGSNATQ68CP4 663 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 NOP9Q86U38 636 aaKnown RBP17.69■□□□□ 0.42
CCNA1-203ENST00000625767 FBXO22Q8NEZ5 403 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 ZNF397Q8NF99 534 aaPredicted RBP17.69■□□□□ 0.42
CCNA1-203ENST00000625767 OLIG1Q8TAK6 271 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 GDPD5Q8WTR4 605 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 TMEM176AQ96HP8 235 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 FAM81BQ96LP2 452 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 CHP1Q99653 195 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 NT5C1AQ9BXI3 368 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 AIPL1Q9NZN9 384 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 DSEQ9UL01 958 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 RWDD3Q9Y3V2 267 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 PLXNA3P51805 1871 aa17.69■□□□□ 0.42
CCNA1-203ENST00000625767 TBC1D4O60343 1298 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 TPM1P09493 284 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 CCDC130P13994 396 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 LHX1P48742 406 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 GLUD2P49448 558 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 YWHAEP62258 255 aaKnown RBP17.68■□□□□ 0.42
CCNA1-203ENST00000625767 DSG1Q02413 1049 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 ASIC2Q16515 512 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 CTXN3Q4LDR2 81 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 TAF3Q5VWG9 929 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 KIAA1841Q6NSI8 718 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 CNGA4Q8IV77 575 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 B3GALNT2Q8NCR0 500 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 OR8K1Q8NGG5 319 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 EPS8L1Q8TE68 723 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 IQCDQ96DY2 449 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 SYT15Q9BQS2 421 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 PLVAPQ9BX97 442 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 PUF60Q9UHX1 559 aaKnown RBP17.68■□□□□ 0.42
CCNA1-203ENST00000625767 GTF3C4Q9UKN8 822 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 MYO6Q9UM54 1294 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 DAAM1Q9Y4D1 1078 aa17.68■□□□□ 0.42
CCNA1-203ENST00000625767 SOX1O00570 391 aaPredicted RBP17.67■□□□□ 0.42
CCNA1-203ENST00000625767 CD19P15391 556 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 CYP11B1P15538 503 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 GNA15P30679 374 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 CA8P35219 290 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 ARPP19P56211 112 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 GPM6BQ13491 265 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 PTPN14Q15678 1187 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 PSMD5Q16401 504 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 MDH1BQ5I0G3 518 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 PLPP4Q5VZY2 271 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 UNC93AQ86WB7 457 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 PIK3R5Q8WYR1 880 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 HEXIM2Q96MH2 286 aaKnown RBP17.67■□□□□ 0.42
CCNA1-203ENST00000625767 PKMYT1Q99640 499 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 TCF25Q9BQ70 676 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 RHOBTB2Q9BYZ6 727 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 HAUS4Q9H6D7 363 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 ARHGAP20Q9P2F6 1191 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 HIDE1A8MVS5 230 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 H3BNC9 293 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms