RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 SPATA31D3P0C874 917 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 KCNE1P15382 129 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 ALCAMQ13740 583 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 POSTNQ15063 836 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 NAB2Q15742 525 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 PSMD5Q16401 504 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 UPP1Q16831 310 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 ZC2HC1CQ53FD0 456 aaPredicted RBP6.95□□□□□ -1.3
TCF4-249ENST00000625716 PRRT3Q5FWE3 981 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 XKR4Q5GH76 650 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 TMEM31Q5JXX7 168 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 RTP2Q5QGT7 225 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 ADALQ6DHV7 355 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 PRSS55Q6UWB4 352 aaPredicted RBP6.95□□□□□ -1.3
TCF4-249ENST00000625716 ALKAL1Q6UXT8 129 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 TMC5Q6UXY8 1006 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.95□□□□□ -1.3
TCF4-249ENST00000625716 SPATA31D4Q6ZUB0 917 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 ZNF720Q7Z2F6 126 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 SFR1Q86XK3 245 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 MAP4K3Q8IVH8 894 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 CD302Q8IX05 232 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 RNF168Q8IYW5 571 aaPredicted RBP6.95□□□□□ -1.3
TCF4-249ENST00000625716 LRRC15Q8TF66 581 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 HDAC7Q8WUI4 952 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 POMGNT1Q8WZA1 660 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 SUSD6Q92537 303 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 KCNN1Q92952 543 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 DHX58Q96C10 678 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 ACSF2Q96CM8 615 aaPredicted RBP6.95□□□□□ -1.3
TCF4-249ENST00000625716 HVCN1Q96D96 273 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 ACCSQ96QU6 501 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 TSPAN18Q96SJ8 248 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 PYM1Q9BRP8 204 aaKnown RBP6.95□□□□□ -1.3
TCF4-249ENST00000625716 CXCL16Q9H2A7 254 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 PLEKHA4Q9H4M7 779 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 EPHX3Q9H6B9 360 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 PLEKHA5Q9HAU0 1116 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 PIDD1Q9HB75 910 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 GOLGA2P5Q9HBQ8 144 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 MAN1C1Q9NR34 630 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 TBC1D7Q9P0N9 293 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 NAGPAQ9UK23 515 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 AGO2Q9UKV8 859 aaKnown RBP6.95□□□□□ -1.3
TCF4-249ENST00000625716 SLC6A14Q9UN76 642 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 ATP6V1DQ9Y5K8 247 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 CHD7Q9P2D1 2997 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 TCF20Q9UGU0 1960 aaKnown RBP6.95□□□□□ -1.3
TCF4-249ENST00000625716 CCDC195A0A1B0GUA6 201 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 LACTBL1A8MY62 500 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 LOC730098B7Z3J9 87 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 H7C4K7 107 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 TMEM189-UBE2V1I3L0A0 370 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 ABLIM1O14639 778 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 TGM5O43548 720 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 EFEMP2O95967 443 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 PIGRP01833 764 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 WEE2P0C1S8 567 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 CXCL8P10145 99 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 MYBP10242 640 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 RPL17P18621 184 aaKnown RBP6.94□□□□□ -1.3
TCF4-249ENST00000625716 SP100P23497 879 aaPredicted RBP6.94□□□□□ -1.3
TCF4-249ENST00000625716 MCM4P33991 863 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 TNFSF9P41273 254 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 ASIC1P78348 528 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 KRT85P78386 507 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 DNM1Q05193 864 aaKnown RBP6.94□□□□□ -1.3
TCF4-249ENST00000625716 SLC10A6Q3KNW5 377 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 L1TD1Q5T7N2 865 aaKnown RBP6.94□□□□□ -1.3
TCF4-249ENST00000625716 LIN9Q5TKA1 542 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 CYP26C1Q6V0L0 522 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 C15orf39Q6ZRI6 1047 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 ANKS3Q6ZW76 656 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 GPR149Q86SP6 731 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 ANKMY2Q8IV38 441 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 CEP57L1Q8IYX8 460 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 TDRD5Q8NAT2 981 aaKnown RBP6.94□□□□□ -1.3
TCF4-249ENST00000625716 KREMEN2Q8NCW0 462 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 APPL2Q8NEU8 664 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 BEST2Q8NFU1 509 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 CMASQ8NFW8 434 aaPredicted RBP6.94□□□□□ -1.3
TCF4-249ENST00000625716 LNX1Q8TBB1 728 aaPredicted RBP6.94□□□□□ -1.3
TCF4-249ENST00000625716 NOC3LQ8WTT2 800 aaKnown RBP6.94□□□□□ -1.3
TCF4-249ENST00000625716 PIK3R5Q8WYR1 880 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 STAMQ92783 540 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 C18orf25Q96B23 403 aaPredicted RBP6.94□□□□□ -1.3
TCF4-249ENST00000625716 DNAJC19Q96DA6 116 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 SPATA32Q96LK8 384 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 TNMDQ9H2S6 317 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 ST6GALNAC4Q9H4F1 302 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 TMEM206Q9H813 350 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 DNAJB12Q9NXW2 375 aaKnown RBP6.94□□□□□ -1.3
TCF4-249ENST00000625716 UBQLN1Q9UMX0 589 aaKnown RBP6.94□□□□□ -1.3
TCF4-249ENST00000625716 PCDHA7Q9UN72 937 aa6.94□□□□□ -1.3
TCF4-249ENST00000625716 TRANK1O15050 2925 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 A0A087X0B3 334 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 A0A0B4J269 797 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 TTC26A0AVF1 554 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 ARHGEF37A1IGU5 675 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 ANKRD63C9JTQ0 380 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms