RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 NIPA2Q8N8Q9 360 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 SLC4A11Q8NBS3 891 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 HEMGNQ9BXL5 484 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 WHRNQ9P202 907 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 ITGA11Q9UKX5 1188 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 R3HDM2Q9Y2K5 976 aaKnown RBP20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 CITO14578 2027 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 IVLP07476 585 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 NUDT17P0C025 328 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 PTK6Q13882 451 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 CCNG2Q16589 344 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 PTPN20Q4JDL3 420 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 CYP4A22Q5TCH4 519 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 RCOR2Q8IZ40 523 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 ATL2Q8NHH9 583 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 HPDLQ96IR7 371 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 RBM41Q96IZ5 413 aaKnown RBP20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 SETD4Q9NVD3 440 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 F8VP50 259 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 STAU1O95793 577 aaKnown RBP20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 GJC1P36383 396 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 CETN2P41208 172 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 GRM5P41594 1212 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 PTPN11Q06124 597 aaPredicted RBP20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 NFX1Q12986 1120 aaKnown RBP20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 CALCOCO2Q13137 446 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 AGBL2Q5U5Z8 902 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 TMEM176AQ96HP8 235 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 TWNKQ96RR1 684 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 ELOVL4Q9GZR5 314 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 CYTH4Q9UIA0 394 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 AGAP1Q9UPQ3 857 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 A6NJR5 290 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 GAS8O95995 478 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 TCF4P15884 667 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 GSCP56915 257 aaPredicted RBP20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 GNGT1P63211 74 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 IRF5Q13568 498 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 SLMAPQ14BN4 828 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 DCAF4L1Q3SXM0 396 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 ANKS1BQ7Z6G8 1248 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 ADAMTS10Q9H324 1103 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 CENPHQ9H3R5 247 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 FAM124BQ9H5Z6 455 aaPredicted RBP20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 DPP3Q9NY33 737 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 HMGXB4Q9UGU5 601 aa20.85■□□□□ 0.93
PCDHB11-202ENST00000624887 GRIN2DO15399 1336 aa20.84■□□□□ 0.93
PCDHB11-202ENST00000624887 MANSC4A6NHS7 340 aaPredicted RBP20.84■□□□□ 0.93
PCDHB11-202ENST00000624887 SIGLEC16A6NMB1 481 aa20.84■□□□□ 0.93
PCDHB11-202ENST00000624887 ITIH2P19823 946 aa20.84■□□□□ 0.93
PCDHB11-202ENST00000624887 RBP5P82980 135 aa20.84■□□□□ 0.93
PCDHB11-202ENST00000624887 CDC42EP1Q00587 391 aa20.84■□□□□ 0.93
PCDHB11-202ENST00000624887 KIZQ2M2Z5 673 aa20.84■□□□□ 0.93
PCDHB11-202ENST00000624887 ATP13A4Q4VNC1 1196 aa20.84■□□□□ 0.93
PCDHB11-202ENST00000624887 MORN1Q5T089 497 aa20.84■□□□□ 0.93
PCDHB11-202ENST00000624887 RGMBQ6NW40 437 aa20.84■□□□□ 0.93
PCDHB11-202ENST00000624887 RNF25Q96BH1 459 aaPredicted RBP20.84■□□□□ 0.93
PCDHB11-202ENST00000624887 SLITRK1Q96PX8 696 aa20.84■□□□□ 0.93
PCDHB11-202ENST00000624887 TP73O15350 636 aa20.83■□□□□ 0.93
PCDHB11-202ENST00000624887 EIF3HO15372 352 aaKnown RBP eCLIP20.83■□□□□ 0.93
PCDHB11-202ENST00000624887 DYNC1LI2O43237 492 aaPredicted RBP20.83■□□□□ 0.93
PCDHB11-202ENST00000624887 RARGP13631 454 aa20.83■□□□□ 0.93
PCDHB11-202ENST00000624887 FGFR4P22455 802 aa20.83■□□□□ 0.93
PCDHB11-202ENST00000624887 ATP1A2P50993 1020 aa20.83■□□□□ 0.93
PCDHB11-202ENST00000624887 IFFO1Q0D2I5 559 aa20.83■□□□□ 0.93
PCDHB11-202ENST00000624887 ORC1Q13415 861 aa20.83■□□□□ 0.93
PCDHB11-202ENST00000624887 DENND2CQ68D51 928 aa20.83■□□□□ 0.93
PCDHB11-202ENST00000624887 WDR35Q9P2L0 1181 aa20.83■□□□□ 0.93
PCDHB11-202ENST00000624887 ASIC3Q9UHC3 531 aa20.83■□□□□ 0.93
PCDHB11-202ENST00000624887 GNEQ9Y223 722 aaKnown RBP20.83■□□□□ 0.93
PCDHB11-202ENST00000624887 NEU2Q9Y3R4 380 aa20.83■□□□□ 0.93
PCDHB11-202ENST00000624887 NRCAMQ92823 1304 aa20.83■□□□□ 0.92
PCDHB11-202ENST00000624887 F2P00734 622 aa20.83■□□□□ 0.92
PCDHB11-202ENST00000624887 IVDP26440 423 aa20.83■□□□□ 0.92
PCDHB11-202ENST00000624887 COPS2P61201 443 aa20.83■□□□□ 0.92
PCDHB11-202ENST00000624887 INCA1Q0VD86 236 aa20.83■□□□□ 0.92
PCDHB11-202ENST00000624887 KRT71Q3SY84 523 aa20.83■□□□□ 0.92
PCDHB11-202ENST00000624887 SNF8Q96H20 258 aa20.83■□□□□ 0.92
PCDHB11-202ENST00000624887 CPXM1Q96SM3 734 aa20.83■□□□□ 0.92
PCDHB11-202ENST00000624887 GCOM2Q9BZD3 368 aaPredicted RBP20.83■□□□□ 0.92
PCDHB11-202ENST00000624887 TSPYL1Q9H0U9 437 aa20.83■□□□□ 0.92
PCDHB11-202ENST00000624887 TMEM51Q9NW97 253 aa20.83■□□□□ 0.92
PCDHB11-202ENST00000624887 CWC15Q9P013 229 aaKnown RBP20.83■□□□□ 0.92
PCDHB11-202ENST00000624887 CPA4Q9UI42 421 aa20.83■□□□□ 0.92
PCDHB11-202ENST00000624887 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.83■□□□□ 0.92
PCDHB11-202ENST00000624887 IGF2BP3O00425 579 aaKnown RBP eCLIP20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 GPR32O75388 356 aa20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 HMGCRP04035 888 aa20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 KRT1P04264 644 aa20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 VDRP11473 427 aa20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 KRT3P12035 628 aa20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 HOXA11P31270 313 aaPredicted RBP20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 RFC1P35251 1148 aaPredicted RBP20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 MAP2K5Q13163 448 aa20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 CNGA2Q16280 664 aa20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 RHBDF2Q6PJF5 856 aa20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 APBB1IPQ7Z5R6 666 aaPredicted RBP20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 TTC39CQ8N584 583 aa20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 ARFGAP2Q8N6H7 521 aa20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 FNIP1Q8TF40 1166 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms