RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 CXCL14O95715 111 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 LHX1P48742 406 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 JAM2P57087 298 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 YWHAHQ04917 246 aaPredicted RBP21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 TBX2Q13207 712 aaPredicted RBP21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 RAPGEF1Q13905 1077 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 MRPL58Q14197 206 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 BMS1Q14692 1282 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 DRAP1Q14919 205 aaPredicted RBP21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 ARHGAP44Q17R89 818 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 TAS1R1Q7RTX1 841 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 CACNA2D4Q7Z3S7 1137 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 RBM23Q86U06 439 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 AUTS2Q8WXX7 1259 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 BAP1Q92560 729 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 GPR88Q9GZN0 384 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 IGFLR1Q9H665 355 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 MYO6Q9UM54 1294 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 CAPN11Q9UMQ6 739 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 CNTN6Q9UQ52 1028 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 CTSAP10619 480 aa21.17■□□□□ 0.98
PDLIM2-221ENST00000622702 CD58P19256 250 aa21.17■□□□□ 0.98
PDLIM2-221ENST00000622702 HYAL1Q12794 435 aa21.17■□□□□ 0.98
PDLIM2-221ENST00000622702 RTP2Q5QGT7 225 aa21.17■□□□□ 0.98
PDLIM2-221ENST00000622702 VARS2Q5ST30 1063 aaKnown RBP21.17■□□□□ 0.98
PDLIM2-221ENST00000622702 OVOS1Q6IE37 1185 aa21.17■□□□□ 0.98
PDLIM2-221ENST00000622702 UNC93AQ86WB7 457 aa21.17■□□□□ 0.98
PDLIM2-221ENST00000622702 OSTM1Q86WC4 334 aa21.17■□□□□ 0.98
PDLIM2-221ENST00000622702 MRPL43Q8N983 215 aaKnown RBP21.17■□□□□ 0.98
PDLIM2-221ENST00000622702 TLE6Q9H808 572 aa21.17■□□□□ 0.98
PDLIM2-221ENST00000622702 PRDM6Q9NQX0 595 aa21.17■□□□□ 0.98
PDLIM2-221ENST00000622702 F8VZ95 297 aa21.16■□□□□ 0.98
PDLIM2-221ENST00000622702 PER2O15055 1255 aa21.16■□□□□ 0.98
PDLIM2-221ENST00000622702 GTF2F1P35269 517 aaKnown RBP eCLIP21.16■□□□□ 0.98
PDLIM2-221ENST00000622702 GNL1P36915 607 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-221ENST00000622702 NRIP1P48552 1158 aa21.16■□□□□ 0.98
PDLIM2-221ENST00000622702 DSG1Q02413 1049 aa21.16■□□□□ 0.98
PDLIM2-221ENST00000622702 ANKS3Q6ZW76 656 aa21.16■□□□□ 0.98
PDLIM2-221ENST00000622702 PPFIBP1Q86W92 1011 aa21.16■□□□□ 0.98
PDLIM2-221ENST00000622702 CEP57Q86XR8 500 aa21.16■□□□□ 0.98
PDLIM2-221ENST00000622702 FAM71AQ8IYT1 594 aa21.16■□□□□ 0.98
PDLIM2-221ENST00000622702 OR6B3Q8NGW1 331 aa21.16■□□□□ 0.98
PDLIM2-221ENST00000622702 PIK3R5Q8WYR1 880 aa21.16■□□□□ 0.98
PDLIM2-221ENST00000622702 B3GALT6Q96L58 329 aa21.16■□□□□ 0.98
PDLIM2-221ENST00000622702 SPAG5Q96R06 1193 aa21.16■□□□□ 0.98
PDLIM2-221ENST00000622702 SNX25Q9H3E2 840 aa21.16■□□□□ 0.98
PDLIM2-221ENST00000622702 NME7Q9Y5B8 376 aa21.16■□□□□ 0.98
PDLIM2-221ENST00000622702 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 C2orf71A6NGG8 1288 aa21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 RNF225M0QZC1 329 aaPredicted RBP21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 FOXN3O00409 490 aaPredicted RBP21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 GLUD2P49448 558 aa21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 ZNF132P52740 706 aa21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 NDST1P52848 882 aa21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 ZBED6P86452 979 aa21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 KIAA0319Q5VV43 1072 aa21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 KIAA1841Q6NSI8 718 aa21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 PDXDC1Q6P996 788 aa21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 WHAMMQ8TF30 809 aa21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 ANP32BQ92688 251 aaKnown RBP21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 RTP3Q9BQQ7 232 aa21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 OXCT2Q9BYC2 517 aaPredicted RBP21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 DDX43Q9NXZ2 648 aaKnown RBP21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 LUC7L2Q9Y383 392 aaKnown RBP21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 PCDHB4Q9Y5E5 795 aa21.15■□□□□ 0.98
PDLIM2-221ENST00000622702 A8MXQ7 604 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 H7C4K7 107 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 C2CD2LO14523 706 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 URODP06132 367 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 TPM1P09493 284 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 LMO2P25791 158 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 PCSK1P29120 753 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 CASP14P31944 242 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 STAT1P42224 750 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 PTPN14Q15678 1187 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 ZNF280DQ6N043 979 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 TMEM270Q6UE05 265 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 DRC7Q8IY82 874 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 THEM5Q8N1Q8 247 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 ZNF397Q8NF99 534 aaPredicted RBP21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 LNX1Q8TBB1 728 aaPredicted RBP21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 CPLX3Q8WVH0 158 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 RIN2Q8WYP3 895 aaPredicted RBP21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 ACBD6Q9BR61 282 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 NT5C1AQ9BXI3 368 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 NUCKS1Q9H1E3 243 aaKnown RBP21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 MRPL17Q9NRX2 175 aaKnown RBP21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 IMPACTQ9P2X3 320 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 HMGXB4Q9UGU5 601 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 BACE2Q9Y5Z0 518 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 IRAK3Q9Y616 596 aa21.14■□□□□ 0.98
PDLIM2-221ENST00000622702 TBC1D4O60343 1298 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 KRT5P13647 590 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 SOX5P35711 763 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 RAD23BP54727 409 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 EP400NLQ6ZTU2 488 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 FMNL3Q8IVF7 1028 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 RBBP8NLQ8NC74 664 aaPredicted RBP21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 HLA-CQ95604 372 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 TWNKQ96RR1 684 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms