RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ENTPD2Q9Y5L3 495 aa5.66□□□□□ -1.5
BRCA1-229ENST00000621897 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 AKAP10O43572 662 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 DNAJB5O75953 348 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 GNAI2P04899 355 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 VCAM1P19320 739 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 CD38P28907 300 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 IL12RB1P42701 662 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 NXPH1P58417 271 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 IGBP1P78318 339 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 CCDC157Q569K6 752 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 AKNAD1Q5T1N1 836 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 IFIT1BQ5T764 474 aaKnown RBP5.65□□□□□ -1.5
BRCA1-229ENST00000621897 TSTD2Q5T7W7 516 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 FAM109AQ8N4B1 249 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 PCSK9Q8NBP7 692 aaKnown RBP5.65□□□□□ -1.5
BRCA1-229ENST00000621897 OSBPL9Q96SU4 736 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 ACTRT3Q9BYD9 372 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 TPSD1Q9BZJ3 242 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 KLC4Q9NSK0 619 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 DKK3Q9UBP4 350 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 PCDHA6Q9UN73 950 aa5.65□□□□□ -1.5
BRCA1-229ENST00000621897 CCDC151A5D8V7 595 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 DCLK1O15075 740 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 TRIAP1O43715 76 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 OFD1O75665 1012 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 PDHA1P08559 390 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 CT47B1P0C2W7 299 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-229ENST00000621897 PIM1P11309 404 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-229ENST00000621897 ITGALP20701 1170 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 GCLCP48506 637 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-229ENST00000621897 RAB27AP51159 221 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 ZNF134P52741 427 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 SOX8P57073 446 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 PROK1P58294 105 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 BRIX1Q8TDN6 353 aaKnown RBP5.64□□□□□ -1.51
BRCA1-229ENST00000621897 DIS3LQ8TF46 1054 aaKnown RBP5.64□□□□□ -1.51
BRCA1-229ENST00000621897 NELL1Q92832 810 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 RFKQ969G6 155 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 PBKQ96KB5 322 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 TIMP4Q99727 224 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 SIK2Q9H0K1 926 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 ARMT1Q9H993 441 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 CPNE5Q9HCH3 593 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 SERHLQ9NQF3 203 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 HESX1Q9UBX0 185 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 ADAM21Q9UKJ8 722 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 ST3GAL5Q9UNP4 418 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 STXBP5LQ9Y2K9 1186 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 RAD54BQ9Y620 910 aa5.64□□□□□ -1.51
BRCA1-229ENST00000621897 AP1G1O43747 822 aa5.63□□□□□ -1.51
BRCA1-229ENST00000621897 RBMXL2O75526 392 aaKnown RBP5.63□□□□□ -1.51
BRCA1-229ENST00000621897 C1RP00736 705 aa5.63□□□□□ -1.51
BRCA1-229ENST00000621897 NR2F6P10588 404 aa5.63□□□□□ -1.51
BRCA1-229ENST00000621897 ITPKBP27987 946 aa5.63□□□□□ -1.51
BRCA1-229ENST00000621897 PCSK6P29122 969 aa5.63□□□□□ -1.51
BRCA1-229ENST00000621897 EMC10Q5UCC4 262 aa5.63□□□□□ -1.51
BRCA1-229ENST00000621897 FAM160B1Q5W0V3 765 aa5.63□□□□□ -1.51
BRCA1-229ENST00000621897 GRASPQ7Z6J2 395 aaPredicted RBP5.63□□□□□ -1.51
BRCA1-229ENST00000621897 TPH2Q8IWU9 490 aa5.63□□□□□ -1.51
BRCA1-229ENST00000621897 KLHDC4Q8TBB5 520 aa5.63□□□□□ -1.51
BRCA1-229ENST00000621897 JPH3Q8WXH2 748 aaPredicted RBP5.63□□□□□ -1.51
BRCA1-229ENST00000621897 DDX17Q92841 729 aaKnown RBP5.63□□□□□ -1.51
BRCA1-229ENST00000621897 FAM136AQ96C01 138 aa5.63□□□□□ -1.51
BRCA1-229ENST00000621897 CDK5RAP3Q96JB5 506 aa5.63□□□□□ -1.51
BRCA1-229ENST00000621897 LRGUKQ96M69 825 aa5.63□□□□□ -1.51
BRCA1-229ENST00000621897 SLC46A1Q96NT5 459 aa5.63□□□□□ -1.51
BRCA1-229ENST00000621897 TTYH3Q9C0H2 523 aa5.63□□□□□ -1.51
BRCA1-229ENST00000621897 ADARB2Q9NS39 739 aaKnown RBP5.63□□□□□ -1.51
BRCA1-229ENST00000621897 STAP2Q9UGK3 403 aa5.63□□□□□ -1.51
BRCA1-229ENST00000621897 ZNF180Q9UJW8 692 aa5.63□□□□□ -1.51
BRCA1-229ENST00000621897 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.63□□□□□ -1.51
BRCA1-229ENST00000621897 ORC4O43929 436 aa5.62□□□□□ -1.51
BRCA1-229ENST00000621897 SOAT2O75908 522 aa5.62□□□□□ -1.51
BRCA1-229ENST00000621897 UNC5CO95185 931 aa5.62□□□□□ -1.51
BRCA1-229ENST00000621897 CD6P30203 668 aa5.62□□□□□ -1.51
BRCA1-229ENST00000621897 NHLH1Q02575 133 aa5.62□□□□□ -1.51
BRCA1-229ENST00000621897 EIF2B5Q13144 721 aaKnown RBP5.62□□□□□ -1.51
BRCA1-229ENST00000621897 KHDC1LQ5JSQ8 128 aa5.62□□□□□ -1.51
BRCA1-229ENST00000621897 TMEM108Q6UXF1 575 aa5.62□□□□□ -1.51
BRCA1-229ENST00000621897 AMIGO2Q86SJ2 522 aa5.62□□□□□ -1.51
BRCA1-229ENST00000621897 RAVER1Q8IY67 606 aaKnown RBP5.62□□□□□ -1.51
BRCA1-229ENST00000621897 PPP1R35Q8TAP8 253 aa5.62□□□□□ -1.51
BRCA1-229ENST00000621897 FKBP10Q96AY3 582 aa5.62□□□□□ -1.51
BRCA1-229ENST00000621897 SARAFQ96BY9 339 aa5.62□□□□□ -1.51
BRCA1-229ENST00000621897 C1GALT1C1Q96EU7 318 aa5.62□□□□□ -1.51
BRCA1-229ENST00000621897 GABBR1Q9UBS5 961 aa5.62□□□□□ -1.51
BRCA1-229ENST00000621897 PNMA8BQ9ULN7 279 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-229ENST00000621897 LOC105371045A0A1W2PR82 267 aa5.61□□□□□ -1.51
BRCA1-229ENST00000621897 PPM1DO15297 605 aa5.61□□□□□ -1.51
BRCA1-229ENST00000621897 URI1O94763 535 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-229ENST00000621897 WT1P19544 449 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-229ENST00000621897 RAB1AP62820 205 aa5.61□□□□□ -1.51
BRCA1-229ENST00000621897 SP2Q02086 613 aa5.61□□□□□ -1.51
BRCA1-229ENST00000621897 B3GNT9Q6UX72 402 aa5.61□□□□□ -1.51
BRCA1-229ENST00000621897 COL23A1Q86Y22 540 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-229ENST00000621897 RASAL3Q86YV0 1011 aa5.61□□□□□ -1.51
BRCA1-229ENST00000621897 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.61□□□□□ -1.51
BRCA1-229ENST00000621897 CAMKK1Q8N5S9 505 aa5.61□□□□□ -1.51
BRCA1-229ENST00000621897 NT5C1BQ96P26 610 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms