RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 PSMD6Q15008 389 aa19.3■□□□□ 0.68
SCAMP4-213ENST00000621748 MGAT5BQ3V5L5 792 aa19.3■□□□□ 0.68
SCAMP4-213ENST00000621748 OSTM1Q86WC4 334 aa19.3■□□□□ 0.68
SCAMP4-213ENST00000621748 WDR49Q8IV35 697 aa19.3■□□□□ 0.68
SCAMP4-213ENST00000621748 C12orf56Q8IXR9 622 aa19.3■□□□□ 0.68
SCAMP4-213ENST00000621748 ELSPBP1Q96BH3 223 aa19.3■□□□□ 0.68
SCAMP4-213ENST00000621748 HPDLQ96IR7 371 aa19.3■□□□□ 0.68
SCAMP4-213ENST00000621748 LPIN3Q9BQK8 851 aa19.3■□□□□ 0.68
SCAMP4-213ENST00000621748 GZF1Q9H116 711 aaPredicted RBP19.3■□□□□ 0.68
SCAMP4-213ENST00000621748 EXOC1Q9NV70 894 aa19.3■□□□□ 0.68
SCAMP4-213ENST00000621748 ASB3Q9Y575 518 aa19.3■□□□□ 0.68
SCAMP4-213ENST00000621748 COL4A3Q01955 1670 aa19.3■□□□□ 0.68
SCAMP4-213ENST00000621748 A0A1W2PRU2 124 aa19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 H0Y858 1186 aa19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 CST3P01034 146 aaPredicted RBP19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 DLATP10515 647 aaKnown RBP19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 HAPLN1P10915 354 aaPredicted RBP19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 ACAT1P24752 427 aaKnown RBP19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 SMARCB1Q12824 385 aa19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 PSMD2Q13200 908 aa19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 SNW1Q13573 536 aaKnown RBP19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 SOWAHAQ2M3V2 549 aa19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 PHLDB3Q6NSJ2 640 aa19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 GAREM2Q75VX8 874 aa19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 TRAPPC11Q7Z392 1133 aa19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 ALYREFQ86V81 257 aaKnown RBP19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 DCP1BQ8IZD4 617 aaKnown RBP19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 TMEM86AQ8N2M4 240 aa19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 SPPL2BQ8TCT7 592 aa19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 C2orf15Q8WU43 125 aaKnown RBP19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 SMARCD2Q92925 531 aa19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 CCDC127Q96BQ5 260 aa19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 ACBD6Q9BR61 282 aa19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 GOLPH3LQ9H4A5 285 aa19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 ZFP14Q9HCL3 533 aa19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 DDX43Q9NXZ2 648 aaKnown RBP19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 ABI2Q9NYB9 513 aaPredicted RBP19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 CGNQ9P2M7 1197 aaKnown RBP19.29■□□□□ 0.68
SCAMP4-213ENST00000621748 A0A1W2PQ27 194 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 A0A1W2PQ64 194 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 A0A1W2PQD8 194 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 HCRTO43612 131 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 MYL1P05976 194 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 PRR29P0C7W0 189 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 TNNI1P19237 187 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 VIPR2P41587 438 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 STARD6P59095 220 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 TSPY1Q01534 308 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 MYO1EQ12965 1108 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 SLC44A4Q53GD3 710 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 STXBP5Q5T5C0 1151 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 LIMS2Q7Z4I7 341 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 ADGRF2Q8IZF7 708 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 TOP6BLQ8N6T0 577 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 FSIP1Q8NA03 581 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 ZSCAN18Q8TBC5 510 aaPredicted RBP19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 GIPC2Q8TF65 315 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 ZNF516Q92618 1163 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 FNBP1Q96RU3 617 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 CGRRF1Q99675 332 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 FAM86C1Q9NVL1 165 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 R3HCC1Q9Y3T6 440 aaKnown RBP19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 PCDHB5Q9Y5E4 795 aa19.28■□□□□ 0.68
SCAMP4-213ENST00000621748 GABRDO14764 452 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 RPN1P04843 607 aaKnown RBP19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 RFX1P22670 979 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 PFKPQ01813 784 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 GRM2Q14416 872 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 MLF2Q15773 248 aaPredicted RBP19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 CCDC142Q17RM4 750 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 ITIH5Q86UX2 942 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 FAM200AQ8TCP9 573 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 PLEKHO2Q8TD55 490 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 KBTBD7Q8WVZ9 684 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 CCDC34Q96HJ3 373 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 PKMYT1Q99640 499 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 PI4K2AQ9BTU6 479 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 FOXQ1Q9C009 403 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 GPR88Q9GZN0 384 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 KCTD10Q9H3F6 313 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 SLITRK6Q9H5Y7 841 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 TRPV4Q9HBA0 871 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 GTF3C4Q9UKN8 822 aa19.27■□□□□ 0.68
SCAMP4-213ENST00000621748 NCANO14594 1321 aa19.26■□□□□ 0.67
SCAMP4-213ENST00000621748 MYO15AQ9UKN7 3530 aa19.26■□□□□ 0.67
SCAMP4-213ENST00000621748 EXOC3O60645 756 aa19.26■□□□□ 0.67
SCAMP4-213ENST00000621748 DCNP07585 359 aaKnown RBP19.26■□□□□ 0.67
SCAMP4-213ENST00000621748 GABRR2P28476 465 aa19.26■□□□□ 0.67
SCAMP4-213ENST00000621748 LHX1P48742 406 aa19.26■□□□□ 0.67
SCAMP4-213ENST00000621748 CASP4P49662 377 aa19.26■□□□□ 0.67
SCAMP4-213ENST00000621748 GPR15P49685 360 aa19.26■□□□□ 0.67
SCAMP4-213ENST00000621748 MYL7Q01449 175 aa19.26■□□□□ 0.67
SCAMP4-213ENST00000621748 DPYDQ12882 1025 aa19.26■□□□□ 0.67
SCAMP4-213ENST00000621748 VEPH1Q14D04 833 aa19.26■□□□□ 0.67
SCAMP4-213ENST00000621748 NFE2Q16621 373 aaPredicted RBP19.26■□□□□ 0.67
SCAMP4-213ENST00000621748 INTS6LQ5JSJ4 861 aaKnown RBP19.26■□□□□ 0.67
SCAMP4-213ENST00000621748 VITQ6UXI7 678 aa19.26■□□□□ 0.67
SCAMP4-213ENST00000621748 KRBA2Q6ZNG9 492 aa19.26■□□□□ 0.67
SCAMP4-213ENST00000621748 DPH6Q7L8W6 267 aa19.26■□□□□ 0.67
SCAMP4-213ENST00000621748 GPIHBP1Q8IV16 184 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms