RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 PPP4R2Q9NY27 417 aa18.13■□□□□ 0.49
TARDBP-225ENST00000621715 OBP2AQ9NY56 170 aa18.13■□□□□ 0.49
TARDBP-225ENST00000621715 KCND2Q9NZV8 630 aa18.13■□□□□ 0.49
TARDBP-225ENST00000621715 LARSQ9P2J5 1176 aaKnown RBP18.13■□□□□ 0.49
TARDBP-225ENST00000621715 ZZEF1O43149 2961 aa18.13■□□□□ 0.49
TARDBP-225ENST00000621715 KIAA1549LQ6ZVL6 1849 aa18.12■□□□□ 0.49
TARDBP-225ENST00000621715 HMGA1P17096 107 aaKnown RBP18.12■□□□□ 0.49
TARDBP-225ENST00000621715 WEE1P30291 646 aa18.12■□□□□ 0.49
TARDBP-225ENST00000621715 HOXA6P31267 233 aa18.12■□□□□ 0.49
TARDBP-225ENST00000621715 MCM6Q14566 821 aa18.12■□□□□ 0.49
TARDBP-225ENST00000621715 MGAT5BQ3V5L5 792 aa18.12■□□□□ 0.49
TARDBP-225ENST00000621715 RILPL1Q5EBL4 403 aa18.12■□□□□ 0.49
TARDBP-225ENST00000621715 WSCD1Q658N2 575 aa18.12■□□□□ 0.49
TARDBP-225ENST00000621715 KBTBD6Q86V97 674 aa18.12■□□□□ 0.49
TARDBP-225ENST00000621715 EFCAB13Q8IY85 973 aa18.12■□□□□ 0.49
TARDBP-225ENST00000621715 MYCT1Q8N699 235 aa18.12■□□□□ 0.49
TARDBP-225ENST00000621715 FAM83CQ9BQN1 747 aa18.12■□□□□ 0.49
TARDBP-225ENST00000621715 GKN1Q9NS71 199 aa18.12■□□□□ 0.49
TARDBP-225ENST00000621715 DPYSL4O14531 572 aa18.11■□□□□ 0.49
TARDBP-225ENST00000621715 AXIN1O15169 862 aa18.11■□□□□ 0.49
TARDBP-225ENST00000621715 CD2BP2O95400 341 aaKnown RBP18.11■□□□□ 0.49
TARDBP-225ENST00000621715 ARSAP15289 507 aa18.11■□□□□ 0.49
TARDBP-225ENST00000621715 CNR2P34972 360 aa18.11■□□□□ 0.49
TARDBP-225ENST00000621715 TMEM132DQ14C87 1099 aa18.11■□□□□ 0.49
TARDBP-225ENST00000621715 CCDC142Q17RM4 750 aa18.11■□□□□ 0.49
TARDBP-225ENST00000621715 ITPRIPL2Q3MIP1 535 aa18.11■□□□□ 0.49
TARDBP-225ENST00000621715 SDHAF4Q5VUM1 108 aa18.11■□□□□ 0.49
TARDBP-225ENST00000621715 ARMCX5Q6P1M9 558 aa18.11■□□□□ 0.49
TARDBP-225ENST00000621715 C1orf228Q6PIY5 440 aa18.11■□□□□ 0.49
TARDBP-225ENST00000621715 CRELD2Q6UXH1 353 aaPredicted RBP18.11■□□□□ 0.49
TARDBP-225ENST00000621715 ZSWIM2Q8NEG5 633 aa18.11■□□□□ 0.49
TARDBP-225ENST00000621715 FAM200AQ8TCP9 573 aa18.11■□□□□ 0.49
TARDBP-225ENST00000621715 EZH1Q92800 747 aaPredicted RBP18.11■□□□□ 0.49
TARDBP-225ENST00000621715 USP13Q92995 863 aaPredicted RBP18.11■□□□□ 0.49
TARDBP-225ENST00000621715 ARRDC1-AS1Q9H2J1 176 aa18.11■□□□□ 0.49
TARDBP-225ENST00000621715 EBF3Q9H4W6 596 aa18.11■□□□□ 0.49
TARDBP-225ENST00000621715 HSFX1Q9UBD0 423 aa18.11■□□□□ 0.49
TARDBP-225ENST00000621715 KCNG1Q9UIX4 513 aa18.11■□□□□ 0.49
TARDBP-225ENST00000621715 ODF2LQ9ULJ1 636 aa18.11■□□□□ 0.49
TARDBP-225ENST00000621715 SPEGQ15772 3267 aa18.1■□□□□ 0.49
TARDBP-225ENST00000621715 CYB561D2O14569 222 aa18.1■□□□□ 0.49
TARDBP-225ENST00000621715 TM4SF5O14894 197 aa18.1■□□□□ 0.49
TARDBP-225ENST00000621715 EGFP01133 1207 aa18.1■□□□□ 0.49
TARDBP-225ENST00000621715 F11P03951 625 aa18.1■□□□□ 0.49
TARDBP-225ENST00000621715 HAPLN1P10915 354 aaPredicted RBP18.1■□□□□ 0.49
TARDBP-225ENST00000621715 MCM2P49736 904 aa18.1■□□□□ 0.49
TARDBP-225ENST00000621715 ARHGAP15Q53QZ3 475 aa18.1■□□□□ 0.49
TARDBP-225ENST00000621715 TMEM196Q5HYL7 178 aa18.1■□□□□ 0.49
TARDBP-225ENST00000621715 CEP68Q76N32 757 aa18.1■□□□□ 0.49
TARDBP-225ENST00000621715 ITIH5Q86UX2 942 aa18.1■□□□□ 0.49
TARDBP-225ENST00000621715 CMTM8Q8IZV2 173 aa18.1■□□□□ 0.49
TARDBP-225ENST00000621715 CDK5RAP3Q96JB5 506 aa18.1■□□□□ 0.49
TARDBP-225ENST00000621715 PYM1Q9BRP8 204 aaKnown RBP18.1■□□□□ 0.49
TARDBP-225ENST00000621715 PARVGQ9HBI0 331 aa18.1■□□□□ 0.49
TARDBP-225ENST00000621715 ABI2Q9NYB9 513 aaPredicted RBP18.1■□□□□ 0.49
TARDBP-225ENST00000621715 ANAPC1Q9H1A4 1944 aa18.1■□□□□ 0.49
TARDBP-225ENST00000621715 H0YCG3 227 aa18.09■□□□□ 0.49
TARDBP-225ENST00000621715 XPOTO43592 962 aaKnown RBP18.09■□□□□ 0.49
TARDBP-225ENST00000621715 TRAK2O60296 914 aa18.09■□□□□ 0.49
TARDBP-225ENST00000621715 TADA3O75528 432 aa18.09■□□□□ 0.49
TARDBP-225ENST00000621715 PLCG1P19174 1290 aa18.09■□□□□ 0.49
TARDBP-225ENST00000621715 KCNA4P22459 653 aa18.09■□□□□ 0.49
TARDBP-225ENST00000621715 RAP1GAPP47736 663 aa18.09■□□□□ 0.49
TARDBP-225ENST00000621715 NLRP12P59046 1061 aa18.09■□□□□ 0.49
TARDBP-225ENST00000621715 GTF2BQ00403 316 aa18.09■□□□□ 0.49
TARDBP-225ENST00000621715 KARSQ15046 597 aaKnown RBP18.09■□□□□ 0.49
TARDBP-225ENST00000621715 KYAT1Q16773 422 aa18.09■□□□□ 0.49
TARDBP-225ENST00000621715 ST3GAL2Q16842 350 aa18.09■□□□□ 0.49
TARDBP-225ENST00000621715 TXNDC8Q6A555 127 aa18.09■□□□□ 0.49
TARDBP-225ENST00000621715 KCTD17Q8N5Z5 321 aa18.09■□□□□ 0.49
TARDBP-225ENST00000621715 MAB21L3Q8N8X9 362 aa18.09■□□□□ 0.49
TARDBP-225ENST00000621715 GAB3Q8WWW8 586 aa18.09■□□□□ 0.49
TARDBP-225ENST00000621715 ANTXRLA6NF34 631 aa18.08■□□□□ 0.48
TARDBP-225ENST00000621715 HCRTO43612 131 aa18.08■□□□□ 0.48
TARDBP-225ENST00000621715 FAM13AO94988 1023 aa18.08■□□□□ 0.48
TARDBP-225ENST00000621715 FGF19O95750 216 aa18.08■□□□□ 0.48
TARDBP-225ENST00000621715 CDC25CP30307 473 aa18.08■□□□□ 0.48
TARDBP-225ENST00000621715 ADSSP30520 456 aa18.08■□□□□ 0.48
TARDBP-225ENST00000621715 TUFMP49411 452 aaKnown RBP18.08■□□□□ 0.48
TARDBP-225ENST00000621715 PLCB2Q00722 1185 aa18.08■□□□□ 0.48
TARDBP-225ENST00000621715 KCNA1Q09470 495 aa18.08■□□□□ 0.48
TARDBP-225ENST00000621715 RUNX3Q13761 415 aa18.08■□□□□ 0.48
TARDBP-225ENST00000621715 N4BP2L1Q5TBK1 243 aaPredicted RBP18.08■□□□□ 0.48
TARDBP-225ENST00000621715 ARL6IP4Q66PJ3 421 aaKnown RBP18.08■□□□□ 0.48
TARDBP-225ENST00000621715 SYNPOQ8N3V7 929 aa18.08■□□□□ 0.48
TARDBP-225ENST00000621715 RAD54LQ92698 747 aa18.08■□□□□ 0.48
TARDBP-225ENST00000621715 SLC22A12Q96S37 553 aa18.08■□□□□ 0.48
TARDBP-225ENST00000621715 TSPAN18Q96SJ8 248 aa18.08■□□□□ 0.48
TARDBP-225ENST00000621715 ZHX3Q9H4I2 956 aa18.08■□□□□ 0.48
TARDBP-225ENST00000621715 DPP3Q9NY33 737 aa18.08■□□□□ 0.48
TARDBP-225ENST00000621715 DERAQ9Y315 318 aa18.08■□□□□ 0.48
TARDBP-225ENST00000621715 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.08■□□□□ 0.48
TARDBP-225ENST00000621715 STYXL1Q9Y6J8 313 aa18.08■□□□□ 0.48
TARDBP-225ENST00000621715 ABCA7Q8IZY2 2146 aa18.07■□□□□ 0.48
TARDBP-225ENST00000621715 RPP40O75818 363 aaKnown RBP18.07■□□□□ 0.48
TARDBP-225ENST00000621715 EPN2O95208 641 aa18.07■□□□□ 0.48
TARDBP-225ENST00000621715 VEPH1Q14D04 833 aa18.07■□□□□ 0.48
TARDBP-225ENST00000621715 C8orf34Q49A92 452 aa18.07■□□□□ 0.48
TARDBP-225ENST00000621715 TCEAL6Q6IPX3 200 aa18.07■□□□□ 0.48
TARDBP-225ENST00000621715 USP49Q70CQ1 688 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms