RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 RIN3Q8TB24 985 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 POMGNT1Q8WZA1 660 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 DNASE1L2Q92874 299 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 SEPT5Q99719 369 aaPredicted RBP12.37□□□□□ -0.43
CPNE3-210ENST00000621245 PYM1Q9BRP8 204 aaKnown RBP12.37□□□□□ -0.43
CPNE3-210ENST00000621245 FAM213AQ9BRX8 229 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 TRMT61BQ9BVS5 477 aaKnown RBP12.37□□□□□ -0.43
CPNE3-210ENST00000621245 ZCWPW1Q9H0M4 648 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 SLITRK6Q9H5Y7 841 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 TRPV4Q9HBA0 871 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 IL21Q9HBE4 155 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 C2orf42Q9NWW7 574 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 DPP3Q9NY33 737 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 PIAS3Q9Y6X2 628 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 SPTBN2O15020 2390 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 CYB561D2O14569 222 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 LAMTOR5O43504 91 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 XPOTO43592 962 aaKnown RBP12.36□□□□□ -0.43
CPNE3-210ENST00000621245 PSMC3P17980 439 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 GABRR2P28476 465 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 PLD1Q13393 1074 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 L1TD1Q5T7N2 865 aaKnown RBP12.36□□□□□ -0.43
CPNE3-210ENST00000621245 RRAGBQ5VZM2 374 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 LMBRD2Q68DH5 695 aaPredicted RBP12.36□□□□□ -0.43
CPNE3-210ENST00000621245 TXNDC11Q6PKC3 985 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 ZNF852Q6ZMS4 543 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 DNAJB7Q7Z6W7 309 aaPredicted RBP12.36□□□□□ -0.43
CPNE3-210ENST00000621245 OSTM1Q86WC4 334 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 KIAA2013Q8IYS2 634 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 TTC13Q8NBP0 860 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 GIPC2Q8TF65 315 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 PSMG2Q969U7 264 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 ZDHHC16Q969W1 377 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 CBWD1Q9BRT8 395 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 OSBPL6Q9BZF3 934 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 MRPL44Q9H9J2 332 aaKnown RBP12.36□□□□□ -0.43
CPNE3-210ENST00000621245 PRMT8Q9NR22 394 aaPredicted RBP12.36□□□□□ -0.43
CPNE3-210ENST00000621245 RBM12Q9NTZ6 932 aaKnown RBP12.36□□□□□ -0.43
CPNE3-210ENST00000621245 STK17AQ9UEE5 414 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 MAFFQ9ULX9 164 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 DERAQ9Y315 318 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 C2CD2Q9Y426 696 aa12.36□□□□□ -0.43
CPNE3-210ENST00000621245 WDFY3Q8IZQ1 3526 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 FRMD3A2A2Y4 597 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 SLC38A8A6NNN8 435 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 PRPF6O94906 941 aaKnown RBP12.35□□□□□ -0.43
CPNE3-210ENST00000621245 GCNT3O95395 438 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 ITGB3P05106 788 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 CCNE1P24864 410 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 POLR2BP30876 1174 aaKnown RBP12.35□□□□□ -0.43
CPNE3-210ENST00000621245 HOXD13P35453 343 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 TAF6P49848 677 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 EPHB3P54753 998 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 TNK2Q07912 1038 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 DMWDQ09019 674 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 GPR158Q5T848 1215 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 SDHAF4Q5VUM1 108 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 Q6ZS52 159 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 TMEM150AQ86TG1 271 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 ARID3BQ8IVW6 561 aaPredicted RBP12.35□□□□□ -0.43
CPNE3-210ENST00000621245 MFSD6LQ8IWD5 586 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 BRSK2Q8IWQ3 736 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 CD302Q8IX05 232 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 PDILTQ8N807 584 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 ZNF454Q8N9F8 522 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 C1orf127Q8N9H9 656 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 NELL1Q92832 810 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 RMDN1Q96DB5 314 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 ATXN3LQ9H3M9 355 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 PCIF1Q9H4Z3 704 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 ASB7Q9H672 318 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 FBXO4Q9UKT5 387 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 L1RE1Q9UN81 338 aa12.35□□□□□ -0.43
CPNE3-210ENST00000621245 SPAG17Q6Q759 2223 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 ZNF263O14978 683 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 TADA3O75528 432 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 CHRNB1P11230 501 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 IDEP14735 1019 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 SCP2P22307 547 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 ACAT1P24752 427 aaKnown RBP12.34□□□□□ -0.43
CPNE3-210ENST00000621245 STAT6P42226 847 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 RPS9P46781 194 aaKnown RBP12.34□□□□□ -0.43
CPNE3-210ENST00000621245 ALDH1A3P47895 512 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 TFAMQ00059 246 aaKnown RBP12.34□□□□□ -0.43
CPNE3-210ENST00000621245 SATB1Q01826 763 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 FCHO2Q0JRZ9 810 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 SLC39A14Q15043 492 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 ZNF528Q3MIS6 628 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 MGAT5BQ3V5L5 792 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 FOXD4L5Q5VV16 416 aaPredicted RBP12.34□□□□□ -0.43
CPNE3-210ENST00000621245 SV2BQ7L1I2 683 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 PDCL2Q8N4E4 241 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 LEMD2Q8NC56 503 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 ZBTB44Q8NCP5 570 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 NOC3LQ8WTT2 800 aaKnown RBP12.34□□□□□ -0.43
CPNE3-210ENST00000621245 DEPDC1BQ8WUY9 529 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 FOXD4L4Q8WXT5 416 aaPredicted RBP12.34□□□□□ -0.43
CPNE3-210ENST00000621245 FAM3CQ92520 227 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 IRF7Q92985 503 aa12.34□□□□□ -0.43
CPNE3-210ENST00000621245 HVCN1Q96D96 273 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms