RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 PCDHA3Q9Y5H8 950 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 GOLGA6BA6NDN3 693 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 PI4K2BG5E9Z4 385 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 DUSP11O75319 330 aaKnown RBP10.52□□□□□ -0.73
VTA1-205ENST00000620996 SATB1Q01826 763 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 PHF13Q86YI8 300 aaPredicted RBP10.52□□□□□ -0.73
VTA1-205ENST00000620996 UBR7Q8N806 425 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 C1orf54Q8WWF1 131 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 RIN2Q8WYP3 895 aaPredicted RBP10.52□□□□□ -0.73
VTA1-205ENST00000620996 RNF25Q96BH1 459 aaPredicted RBP10.52□□□□□ -0.73
VTA1-205ENST00000620996 MTG1Q9BT17 334 aaPredicted RBP10.52□□□□□ -0.73
VTA1-205ENST00000620996 TMEM59LQ9UK28 342 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 HPCAL4Q9UM19 191 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 CNTN6Q9UQ52 1028 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 C2CD2Q9Y426 696 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 MBLAC1A4D2B0 266 aaPredicted RBP10.52□□□□□ -0.73
VTA1-205ENST00000620996 MAP2K7O14733 419 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 PROSCO94903 275 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 MMP8P22894 467 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 ATICP31939 592 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 KCNJ1P48048 391 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 SLC4A11Q8NBS3 891 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 AENQ8WTP8 325 aaKnown RBP10.52□□□□□ -0.73
VTA1-205ENST00000620996 CCDC114Q96M63 670 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 XPNPEP3Q9NQH7 507 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 RRP15Q9Y3B9 282 aaKnown RBP10.52□□□□□ -0.73
VTA1-205ENST00000620996 TRPM7Q96QT4 1865 aa10.52□□□□□ -0.73
VTA1-205ENST00000620996 MICAL2O94851 1124 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 PDGFRBP09619 1106 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 ATF7P17544 494 aaPredicted RBP10.51□□□□□ -0.73
VTA1-205ENST00000620996 RGS7P49802 495 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 PEX5P50542 639 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 SGO2Q562F6 1265 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 ACOT1Q86TX2 421 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 SLC13A5Q86YT5 568 aaPredicted RBP10.51□□□□□ -0.73
VTA1-205ENST00000620996 C12orf29Q8N999 325 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 SNX27Q96L92 541 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 SLITRK6Q9H5Y7 841 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 CDY2AQ9Y6F7 541 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 HSF2BPO75031 334 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 LSM8O95777 96 aaKnown RBP10.51□□□□□ -0.73
VTA1-205ENST00000620996 PRKAR2AP13861 404 aaKnown RBP10.51□□□□□ -0.73
VTA1-205ENST00000620996 CCND3P30281 292 aaPredicted RBP10.51□□□□□ -0.73
VTA1-205ENST00000620996 TAS2R40P59535 323 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 PPP1R7Q15435 360 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 RHOT1Q8IXI2 618 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 EMC1Q8N766 993 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 ATG4AQ8WYN0 398 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 MRPL45Q9BRJ2 306 aaKnown RBP10.51□□□□□ -0.73
VTA1-205ENST00000620996 BCO2Q9BYV7 579 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 CENPHQ9H3R5 247 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 GDF3Q9NR23 364 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 IP6K2Q9UHH9 426 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 RASAL2Q9UJF2 1139 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 SNX24Q9Y343 169 aa10.51□□□□□ -0.73
VTA1-205ENST00000620996 HAS3O00219 553 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 CILPO75339 1184 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 TRPA1O75762 1119 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 KRT1P04264 644 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 PSMA2P25787 234 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 CTNNA2P26232 953 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 SLC1A1P43005 524 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 LMAN1P49257 510 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 CRYBB1P53674 252 aaPredicted RBP10.5□□□□□ -0.73
VTA1-205ENST00000620996 TCEAL1Q15170 157 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 PTPN20Q4JDL3 420 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 PPP1R2P3Q6NXS1 205 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 EMBQ6PCB8 327 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 CCDC137Q6PK04 289 aaKnown RBP10.5□□□□□ -0.73
VTA1-205ENST00000620996 RSPH3Q86UC2 560 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 CD302Q8IX05 232 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 WDTC1Q8N5D0 677 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 CD101Q93033 1021 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 NT5C1AQ9BXI3 368 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 ZWILCHQ9H900 591 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 METTL5Q9NRN9 209 aaKnown RBP10.5□□□□□ -0.73
VTA1-205ENST00000620996 FAN1Q9Y2M0 1017 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 F8VP50 259 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 PHF2O75151 1096 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 RPS6KA5O75582 802 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 GRAP2O75791 330 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 MYCP01106 439 aaPredicted RBP10.5□□□□□ -0.73
VTA1-205ENST00000620996 KRT3P12035 628 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 CYBAP13498 195 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 GGCXP38435 758 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 THPOP40225 353 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 TM4SF4P48230 202 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 VPS41P49754 854 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 CACNB2Q08289 660 aaPredicted RBP10.5□□□□□ -0.73
VTA1-205ENST00000620996 CLUL1Q15846 466 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 GOLGA7BQ2TAP0 167 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 ATP13A4Q4VNC1 1196 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 PLEKHA7Q6IQ23 1121 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 GDF6Q6KF10 455 aaPredicted RBP10.5□□□□□ -0.73
VTA1-205ENST00000620996 TSEN2Q8NCE0 465 aaKnown RBP10.5□□□□□ -0.73
VTA1-205ENST00000620996 VCPIP1Q96JH7 1222 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 LPIN3Q9BQK8 851 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 RAB17Q9H0T7 212 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 BARX2Q9UMQ3 279 aaPredicted RBP10.5□□□□□ -0.73
VTA1-205ENST00000620996 A8MXQ7 604 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms