RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 HSFX1Q9UBD0 423 aa18.47■□□□□ 0.55
HMGN3-203ENST00000620514 MTF2Q9Y483 593 aaPredicted RBP18.47■□□□□ 0.55
HMGN3-203ENST00000620514 ASB3Q9Y575 518 aa18.47■□□□□ 0.55
HMGN3-203ENST00000620514 SNX9Q9Y5X1 595 aa18.47■□□□□ 0.55
HMGN3-203ENST00000620514 A0A1B0GVL5 298 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 PVALEFA0A1B0GWK0 134 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 KANSL1LA0AUZ9 987 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 HCRTO43612 131 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 KLRC4O43908 158 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 HUS1O60921 280 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 SLFN14P0C7P3 912 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 HAPLN1P10915 354 aaPredicted RBP18.46■□□□□ 0.55
HMGN3-203ENST00000620514 PFKFB1P16118 471 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 ACAT1P24752 427 aaKnown RBP18.46■□□□□ 0.55
HMGN3-203ENST00000620514 TUFMP49411 452 aaKnown RBP18.46■□□□□ 0.55
HMGN3-203ENST00000620514 CYP2J2P51589 502 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 PRKCQQ04759 706 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 TPRG1Q6ZUI0 275 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 DCP1BQ8IZD4 617 aaKnown RBP18.46■□□□□ 0.55
HMGN3-203ENST00000620514 FAM200AQ8TCP9 573 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 SPPL2BQ8TCT7 592 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 RSPRY1Q96DX4 576 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 PAGE5Q96GU1 130 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 ANKRD36BP1Q96IX9 119 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 HEBP1Q9NRV9 189 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 GDAP2Q9NXN4 497 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 DDX43Q9NXZ2 648 aaKnown RBP18.46■□□□□ 0.55
HMGN3-203ENST00000620514 UBE4BO95155 1302 aa18.46■□□□□ 0.55
HMGN3-203ENST00000620514 TNNC2P02585 160 aa18.45■□□□□ 0.54
HMGN3-203ENST00000620514 GABRR2P28476 465 aa18.45■□□□□ 0.54
HMGN3-203ENST00000620514 GPR15P49685 360 aa18.45■□□□□ 0.54
HMGN3-203ENST00000620514 UBXN2BQ14CS0 331 aa18.45■□□□□ 0.54
HMGN3-203ENST00000620514 SNRNP35Q16560 246 aaKnown RBP18.45■□□□□ 0.54
HMGN3-203ENST00000620514 CCDC142Q17RM4 750 aa18.45■□□□□ 0.54
HMGN3-203ENST00000620514 BMT2Q1RMZ1 405 aa18.45■□□□□ 0.54
HMGN3-203ENST00000620514 ITIH5Q86UX2 942 aa18.45■□□□□ 0.54
HMGN3-203ENST00000620514 STKLD1Q8NE28 680 aa18.45■□□□□ 0.54
HMGN3-203ENST00000620514 C2orf15Q8WU43 125 aaKnown RBP18.45■□□□□ 0.54
HMGN3-203ENST00000620514 SPATA32Q96LK8 384 aa18.45■□□□□ 0.54
HMGN3-203ENST00000620514 PI4K2AQ9BTU6 479 aa18.45■□□□□ 0.54
HMGN3-203ENST00000620514 MKNK1Q9BUB5 465 aa18.45■□□□□ 0.54
HMGN3-203ENST00000620514 TRMT61BQ9BVS5 477 aaKnown RBP18.45■□□□□ 0.54
HMGN3-203ENST00000620514 ATXN3LQ9H3M9 355 aa18.45■□□□□ 0.54
HMGN3-203ENST00000620514 BRD9Q9H8M2 597 aa18.45■□□□□ 0.54
HMGN3-203ENST00000620514 TRPV4Q9HBA0 871 aa18.45■□□□□ 0.54
HMGN3-203ENST00000620514 IL21Q9HBE4 155 aa18.45■□□□□ 0.54
HMGN3-203ENST00000620514 KIAA1586Q9HCI6 787 aa18.45■□□□□ 0.54
HMGN3-203ENST00000620514 LTB4R2Q9NPC1 389 aa18.45■□□□□ 0.54
HMGN3-203ENST00000620514 SHISA7A6NL88 538 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 HEPACAM2A8MVW5 462 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 DLATP10515 647 aaKnown RBP18.44■□□□□ 0.54
HMGN3-203ENST00000620514 PSMC3P17980 439 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 CMA1P23946 247 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 GDI1P31150 447 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 NBL1P41271 181 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 KRT85P78386 507 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 CYP4F8P98187 520 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 TSPY1Q01534 308 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 SMARCB1Q12824 385 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 VEPH1Q14D04 833 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 SURF1Q15526 300 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 DUOXA2Q1HG44 320 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 SOWAHAQ2M3V2 549 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 GPR158Q5T848 1215 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 FRMD5Q7Z6J6 570 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 WDR49Q8IV35 697 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 ADGRF2Q8IZF7 708 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 XXYLT1Q8NBI6 393 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 HPDLQ96IR7 371 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 PKMYT1Q99640 499 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 ACBD6Q9BR61 282 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 GPR88Q9GZN0 384 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 HPSEQ9Y251 543 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 PCDHB5Q9Y5E4 795 aa18.44■□□□□ 0.54
HMGN3-203ENST00000620514 FAM170BA6NMN3 283 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 PROB1E7EW31 1015 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 GFRA3O60609 400 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 MYL7Q01449 175 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 CYP24A1Q07973 514 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 STK4Q13043 487 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 PSMD6Q15008 389 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 KNOP1Q1ED39 458 aaKnown RBP18.43■□□□□ 0.54
HMGN3-203ENST00000620514 INTS6LQ5JSJ4 861 aaKnown RBP18.43■□□□□ 0.54
HMGN3-203ENST00000620514 SDHAF4Q5VUM1 108 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 HS2ST1Q7LGA3 356 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 TRAPPC11Q7Z392 1133 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 MFSD6LQ8IWD5 586 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 TMEM86AQ8N2M4 240 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 TOP6BLQ8N6T0 577 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 KIAA0895Q8NCT3 520 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 DEPDC1BQ8WUY9 529 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 DNASE1L2Q92874 299 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 CCDC127Q96BQ5 260 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 GZF1Q9H116 711 aaPredicted RBP18.43■□□□□ 0.54
HMGN3-203ENST00000620514 GTF3C4Q9UKN8 822 aa18.43■□□□□ 0.54
HMGN3-203ENST00000620514 R3HCC1Q9Y3T6 440 aaKnown RBP18.43■□□□□ 0.54
HMGN3-203ENST00000620514 GABRDO14764 452 aa18.42■□□□□ 0.54
HMGN3-203ENST00000620514 PRPF40AO75400 957 aaKnown RBP18.42■□□□□ 0.54
HMGN3-203ENST00000620514 CST3P01034 146 aaPredicted RBP18.42■□□□□ 0.54
HMGN3-203ENST00000620514 TNNI1P19237 187 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms