RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 FAM114A2Q9NRY5 505 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 CYTH4Q9UIA0 394 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 KIAA1257Q9ULG3 409 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 USTQ9Y2C2 406 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 GOLGA6BA6NDN3 693 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 TMEM88BA6NKF7 163 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 AKAP5P24588 427 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 PTPN20Q4JDL3 420 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 CYP4A22Q5TCH4 519 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 ALS2CLQ60I27 953 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 MREGQ8N565 214 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 C18orf25Q96B23 403 aaPredicted RBP20.17■□□□□ 0.82
PSPC1-206ENST00000619300 MCEEQ96PE7 176 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 ERP44Q9BS26 406 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 TRIM51Q9BSJ1 452 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 TUBGCP4Q9UGJ1 667 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.17■□□□□ 0.82
PSPC1-206ENST00000619300 AGPSO00116 658 aa20.16■□□□□ 0.82
PSPC1-206ENST00000619300 MICAL2O94851 1124 aa20.16■□□□□ 0.82
PSPC1-206ENST00000619300 SYF2O95926 243 aaKnown RBP20.16■□□□□ 0.82
PSPC1-206ENST00000619300 HMGCRP04035 888 aa20.16■□□□□ 0.82
PSPC1-206ENST00000619300 GGCXP38435 758 aa20.16■□□□□ 0.82
PSPC1-206ENST00000619300 PTGIRP43119 386 aa20.16■□□□□ 0.82
PSPC1-206ENST00000619300 UBXN11Q5T124 520 aa20.16■□□□□ 0.82
PSPC1-206ENST00000619300 PAXIP1Q6ZW49 1069 aaPredicted RBP20.16■□□□□ 0.82
PSPC1-206ENST00000619300 KATNAL2Q8IYT4 538 aa20.16■□□□□ 0.82
PSPC1-206ENST00000619300 LRRC52Q8N7C0 313 aa20.16■□□□□ 0.82
PSPC1-206ENST00000619300 RUNDC3BQ96NL0 473 aa20.16■□□□□ 0.82
PSPC1-206ENST00000619300 APOL6Q9BWW8 343 aa20.16■□□□□ 0.82
PSPC1-206ENST00000619300 SPC25Q9HBM1 224 aa20.16■□□□□ 0.82
PSPC1-206ENST00000619300 O00370 1275 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 PGK1P00558 417 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 SSR1P43307 286 aaKnown RBP20.15■□□□□ 0.82
PSPC1-206ENST00000619300 SGO2Q562F6 1265 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 DUPD1Q68J44 220 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 TTC27Q6P3X3 843 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 CCDC137Q6PK04 289 aaKnown RBP20.15■□□□□ 0.82
PSPC1-206ENST00000619300 JAMLQ86YT9 394 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 C12orf50Q8NA57 414 aaPredicted RBP20.15■□□□□ 0.82
PSPC1-206ENST00000619300 MAIP1Q8WWC4 291 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 NT5C1AQ9BXI3 368 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 UPF3AQ9H1J1 476 aaKnown RBP20.15■□□□□ 0.82
PSPC1-206ENST00000619300 RASAL2Q9UJF2 1139 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 UBQLN1Q9UMX0 589 aaKnown RBP20.15■□□□□ 0.82
PSPC1-206ENST00000619300 CITO14578 2027 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 SIGLEC16A6NMB1 481 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 PPEF2O14830 753 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 COILP38432 576 aaPredicted RBP20.15■□□□□ 0.82
PSPC1-206ENST00000619300 DRG2P55039 364 aaKnown RBP20.15■□□□□ 0.82
PSPC1-206ENST00000619300 PIGHQ14442 188 aaPredicted RBP20.15■□□□□ 0.82
PSPC1-206ENST00000619300 LLGL1Q15334 1064 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 KCTD19Q17RG1 926 aaPredicted RBP20.15■□□□□ 0.82
PSPC1-206ENST00000619300 NBPF20Q3BBV1 942 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 GLRA4Q5JXX5 417 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 CYP4F22Q6NT55 531 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 CXCL17Q6UXB2 119 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 TSPAN18Q96SJ8 248 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 LRRC19Q9H756 370 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 WDR35Q9P2L0 1181 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 SNX9Q9Y5X1 595 aa20.15■□□□□ 0.82
PSPC1-206ENST00000619300 SMIM28A0A1B0GU29 152 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 PODXLO00592 558 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 SEPT4O43236 478 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 GPD2P43304 727 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 FNTAP49354 379 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 PSMC1P62191 440 aaKnown RBP20.14■□□□□ 0.81
PSPC1-206ENST00000619300 ZNF252P-AS1Q0IIN9 211 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 TERF2Q15554 542 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 XKR4Q5GH76 650 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 C9orf57Q5W0N0 161 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 SMC1BQ8NDV3 1235 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 EXD1Q8NHP7 514 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 CPXM1Q96SM3 734 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 NEUROG2Q9H2A3 272 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 DPH5Q9H2P9 285 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 RNF39Q9H2S5 420 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 PARP2Q9UGN5 583 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 GTF2IRD1Q9UHL9 959 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 F8VP50 259 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 M0QYV0 167 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 HSF2BPO75031 334 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 CD4P01730 458 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 RARBP10826 455 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 KRT3P12035 628 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 KCNE1P15382 129 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 GSCP56915 257 aaPredicted RBP20.14■□□□□ 0.81
PSPC1-206ENST00000619300 FAM193AP78312 1265 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 NKX3-2P78367 333 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 OGDHQ02218 1023 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 PRKCZQ05513 592 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 ZNF268Q14587 947 aaPredicted RBP20.14■□□□□ 0.81
PSPC1-206ENST00000619300 LRRC38Q5VT99 294 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 NIPA2Q8N8Q9 360 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 TRIM31Q9BZY9 425 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 SYNCQ9H7C4 482 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 KLK14Q9P0G3 267 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 TJP2Q9UDY2 1190 aa20.14■□□□□ 0.81
PSPC1-206ENST00000619300 ATF7P17544 494 aaPredicted RBP20.13■□□□□ 0.81
PSPC1-206ENST00000619300 HSPA9P38646 679 aaKnown RBP20.13■□□□□ 0.81
PSPC1-206ENST00000619300 MRPS6P82932 125 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms