RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 GJB6O95452 261 aa13.48□□□□□ -0.25
TNFAIP3-209ENST00000619035 LSM8O95777 96 aaKnown RBP13.48□□□□□ -0.25
TNFAIP3-209ENST00000619035 SOX4Q06945 474 aaPredicted RBP13.48□□□□□ -0.25
TNFAIP3-209ENST00000619035 PAK2Q13177 524 aa13.48□□□□□ -0.25
TNFAIP3-209ENST00000619035 XKR4Q5GH76 650 aa13.48□□□□□ -0.25
TNFAIP3-209ENST00000619035 LHX8Q68G74 356 aa13.48□□□□□ -0.25
TNFAIP3-209ENST00000619035 RNF169Q8NCN4 708 aa13.48□□□□□ -0.25
TNFAIP3-209ENST00000619035 LPPQ93052 612 aa13.48□□□□□ -0.25
TNFAIP3-209ENST00000619035 PADI3Q9ULW8 664 aa13.48□□□□□ -0.25
TNFAIP3-209ENST00000619035 BARX2Q9UMQ3 279 aaPredicted RBP13.48□□□□□ -0.25
TNFAIP3-209ENST00000619035 CES2O00748 559 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 RAD51CO43502 376 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 HEXIM1O94992 359 aaKnown RBP13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 CD4P01730 458 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 KCNE1P15382 129 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 ATF7P17544 494 aaPredicted RBP13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 MMP8P22894 467 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 MLH1P40692 756 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 MARCKSL1P49006 195 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 GUCY2DQ02846 1103 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 C1QBPQ07021 282 aaKnown RBP13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 FAM26DQ5JW98 314 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 FBXO47Q5MNV8 452 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 FAM43BQ6ZT52 329 aaPredicted RBP13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 LRRC52Q8N7C0 313 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 UBL4BQ8N7F7 174 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 KRT35Q92764 455 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 MRPL45Q9BRJ2 306 aaKnown RBP13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 BEGAINQ9BUH8 593 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 TRPV6Q9H1D0 765 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 EPB41L5Q9HCM4 733 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 PCDHGC3Q9UN70 934 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 NR2E1Q9Y466 385 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 SCN1AP35498 2009 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 A0A1W2PQ45 241 aaPredicted RBP13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 A0A1W2PQY0 241 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 PGRMC1O00264 195 aaKnown RBP13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 MCM3P25205 808 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 CARSP49589 748 aaKnown RBP13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 INCA1Q0VD86 236 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 PTP4A2Q12974 167 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 CYP4A22Q5TCH4 519 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 SND1Q7KZF4 910 aaKnown RBP eCLIP13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 ERICH1Q86X53 443 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 HACE1Q8IYU2 909 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 WDTC1Q8N5D0 677 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 AENQ8WTP8 325 aaKnown RBP13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 IFT81Q8WYA0 676 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 ALG3Q92685 438 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 DDX47Q9H0S4 455 aaKnown RBP13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 MRPL47Q9HD33 250 aaKnown RBP13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 STARD7Q9NQZ5 370 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 TMEM59LQ9UK28 342 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 SCINQ9Y6U3 715 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 FRMPD3Q5JV73 1810 aa13.47□□□□□ -0.25
TNFAIP3-209ENST00000619035 PDCD11Q14690 1871 aaKnown RBP13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 A0A0U1RQG5 324 aaPredicted RBP13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 MIF4GDA9UHW6 222 aaKnown RBP13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 M0QYV0 167 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 MYO1FO00160 1098 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 PTGESO14684 152 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 CALB1P05937 261 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 FAM193AP78312 1265 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 MAMLD1Q13495 774 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 LPIN1Q14693 890 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 MAP9Q49MG5 647 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 GLIPR1L2Q4G1C9 344 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 ZNF618Q5T7W0 954 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 SLC43A3Q8NBI5 491 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 ACTRT1Q8TDG2 376 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 RIN2Q8WYP3 895 aaPredicted RBP13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 VCPIP1Q96JH7 1222 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 ZNF560Q96MR9 790 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 RPS6KC1Q96S38 1066 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.46□□□□□ -0.258e-7■■□□□ 14.5
TNFAIP3-209ENST00000619035 TRAIPQ9BWF2 469 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 NT5C1AQ9BXI3 368 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 ZNF518BQ9C0D4 1074 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 CACNG4Q9UBN1 327 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 HPCAL4Q9UM19 191 aa13.46□□□□□ -0.25
TNFAIP3-209ENST00000619035 KPNA7A9QM74 516 aa13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 SPTLC1O15269 473 aa13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 MGEA5O60502 916 aa13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 MICAL2O94851 1124 aa13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 CYP3A5P20815 502 aa13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 TERF2Q15554 542 aa13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 SGO2Q562F6 1265 aa13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 DAB2IPQ5VWQ8 1189 aa13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 ACOT1Q86TX2 421 aa13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 C12orf29Q8N999 325 aa13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 OR6B3Q8NGW1 331 aa13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 RNPC3Q96LT9 517 aaKnown RBP13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 GAD1Q99259 594 aa13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 SYNCQ9H7C4 482 aa13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 ERVK-5Q9HDB9 667 aa13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 PARVAQ9NVD7 372 aa13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 CYTH4Q9UIA0 394 aa13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 NFU1Q9UMS0 254 aa13.46□□□□□ -0.26
TNFAIP3-209ENST00000619035 KRIT1O00522 736 aa13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 PIRO00625 290 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms