RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 PIAS1O75925 651 aa20.33■□□□□ 0.84
PCDHGB3-202ENST00000618934 TJP3O95049 919 aa20.33■□□□□ 0.84
PCDHGB3-202ENST00000618934 ARIH2O95376 493 aa20.33■□□□□ 0.84
PCDHGB3-202ENST00000618934 STX2P32856 288 aa20.33■□□□□ 0.84
PCDHGB3-202ENST00000618934 RFC1P35251 1148 aaPredicted RBP20.33■□□□□ 0.84
PCDHGB3-202ENST00000618934 CDKN2BP42772 138 aa20.33■□□□□ 0.84
PCDHGB3-202ENST00000618934 RAP1GAPP47736 663 aa20.33■□□□□ 0.84
PCDHGB3-202ENST00000618934 MGAT5Q09328 741 aa20.33■□□□□ 0.84
PCDHGB3-202ENST00000618934 LAMTOR4Q0VGL1 99 aa20.33■□□□□ 0.84
PCDHGB3-202ENST00000618934 SNCBQ16143 134 aa20.33■□□□□ 0.84
PCDHGB3-202ENST00000618934 KIAA0319LQ8IZA0 1049 aa20.33■□□□□ 0.84
PCDHGB3-202ENST00000618934 RMDN2Q96LZ7 410 aa20.33■□□□□ 0.84
PCDHGB3-202ENST00000618934 CHUKO15111 745 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 TOM1L1O75674 476 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 CALB1P05937 261 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 TAC1P20366 129 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 IBSPP21815 317 aaPredicted RBP20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 DYNLT1P63172 113 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 CCDC142Q17RM4 750 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 KCNT1Q5JUK3 1230 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 TMEM192Q8IY95 271 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 THNSL1Q8IYQ7 743 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 RNF149Q8NC42 400 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 JOSD2Q8TAC2 188 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 TRAPPC12Q8WVT3 735 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 NIF3L1Q9GZT8 377 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 XYLT2Q9H1B5 865 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 GGA3Q9NZ52 723 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 EXOC1LA0A1B0GW35 172 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 C3orf70A6NLC5 250 aaPredicted RBP20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 ZBTB42B2RXF5 422 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 IFNB1P01574 187 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 HOXC6P09630 235 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 IL1R2P27930 398 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 ASPAP45381 313 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 NCALDP61601 193 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 KCNJ2P63252 427 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 PKN2Q16513 984 aaKnown RBP20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 GALNTL6Q49A17 601 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 ZPBP2Q6X784 338 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 SPATA21Q7Z572 469 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 TAB3Q8N5C8 712 aaPredicted RBP20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 CCDC63Q8NA47 563 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 TMEM35BQ8NCS4 154 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 CHST13Q8NET6 341 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 SPOCK2Q92563 424 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 PRKAG3Q9UGI9 489 aa20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 CPSF3Q9UKF6 684 aaKnown RBP20.32■□□□□ 0.84
PCDHGB3-202ENST00000618934 LOC285556D6RIA3 1793 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 B4GALT5O43286 388 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 GSTA1P08263 222 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 VCPP55072 806 aaKnown RBP20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 MTM1Q13496 603 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 DUOXA2Q1HG44 320 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 PTPN20Q4JDL3 420 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 TFDP3Q5H9I0 405 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 DRICH1Q6PGQ1 229 aaPredicted RBP20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 ERICH1Q86X53 443 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 FITM2Q8N6M3 262 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 ANKLE1Q8NAG6 615 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 TCP11Q8WWU5 503 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 THOC1Q96FV9 657 aaKnown RBP20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 PAIP2Q9BPZ3 127 aaKnown RBP20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 MRPL4Q9BYD3 311 aaKnown RBP20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 ZWILCHQ9H900 591 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 GRID1Q9ULK0 1009 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 PRKCBP05771 671 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 GDF10P55107 478 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 CDH8P55286 799 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 PLCB3Q01970 1234 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 HSDL1Q3SXM5 330 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 RNASEH2BQ5TBB1 312 aaKnown RBP20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 LBX2Q6XYB7 198 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 FAM47EQ6ZV65 393 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 TRABD2AQ86V40 505 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 CCDC77Q9BR77 488 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 YY1AP1Q9H869 796 aa20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 NXF1Q9UBU9 619 aaKnown RBP20.31■□□□□ 0.84
PCDHGB3-202ENST00000618934 BRCA1P38398 1863 aaKnown RBP20.3■□□□□ 0.84
PCDHGB3-202ENST00000618934 WDR90Q96KV7 1748 aa20.3■□□□□ 0.84
PCDHGB3-202ENST00000618934 OGTO15294 1046 aa20.3■□□□□ 0.84
PCDHGB3-202ENST00000618934 SUN1O94901 812 aa20.3■□□□□ 0.84
PCDHGB3-202ENST00000618934 LSM8O95777 96 aaKnown RBP20.3■□□□□ 0.84
PCDHGB3-202ENST00000618934 ABHD2P08910 425 aa20.3■□□□□ 0.84
PCDHGB3-202ENST00000618934 CETN2P41208 172 aa20.3■□□□□ 0.84
PCDHGB3-202ENST00000618934 SGSM1Q2NKQ1 1148 aa20.3■□□□□ 0.84
PCDHGB3-202ENST00000618934 LRRC38Q5VT99 294 aa20.3■□□□□ 0.84
PCDHGB3-202ENST00000618934 EEF1DP3Q658K8 133 aa20.3■□□□□ 0.84
PCDHGB3-202ENST00000618934 ANKMY2Q8IV38 441 aa20.3■□□□□ 0.84
PCDHGB3-202ENST00000618934 ZBED8Q8IZ13 594 aa20.3■□□□□ 0.84
PCDHGB3-202ENST00000618934 MAGEB18Q96M61 343 aa20.3■□□□□ 0.84
PCDHGB3-202ENST00000618934 TRIM33Q9UPN9 1127 aa20.3■□□□□ 0.84
PCDHGB3-202ENST00000618934 SGK1O00141 431 aa20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 CD48P09326 243 aa20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 EDNRBP24530 442 aa20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 LMNB2Q03252 620 aa20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 MCL1Q07820 350 aa20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 TRPC3Q13507 836 aa20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 ANKRD22Q5VYY1 191 aa20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 NCAPG2Q86XI2 1143 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms