RNA–Protein interactions for RNA: ENST00000617847.4

DDB2-213, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 5

Gene DDB2, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-213ENST00000617847 INTS6LQ5JSJ4 861 aaKnown RBP13.35□□□□□ -0.27
DDB2-213ENST00000617847 RBM43Q6ZSC3 357 aaKnown RBP13.35□□□□□ -0.27
DDB2-213ENST00000617847 GRASPQ7Z6J2 395 aaPredicted RBP13.35□□□□□ -0.27
DDB2-213ENST00000617847 DCP1BQ8IZD4 617 aaKnown RBP13.35□□□□□ -0.27
DDB2-213ENST00000617847 TAF4BQ92750 862 aa13.35□□□□□ -0.27
DDB2-213ENST00000617847 AVENQ9NQS1 362 aaPredicted RBP13.35□□□□□ -0.27
DDB2-213ENST00000617847 TMLHEQ9NVH6 421 aa13.35□□□□□ -0.27
DDB2-213ENST00000617847 DNMT3BQ9UBC3 853 aaKnown RBP13.35□□□□□ -0.27
DDB2-213ENST00000617847 YIPF1Q9Y548 306 aa13.35□□□□□ -0.27
DDB2-213ENST00000617847 NME7Q9Y5B8 376 aa13.35□□□□□ -0.27
DDB2-213ENST00000617847 HCRTO43612 131 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 LRG1P02750 347 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 PCSK1P29120 753 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 TNNC1P63316 161 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 TSPY1Q01534 308 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 ZNF667Q5HYK9 610 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 KRT39Q6A163 491 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 FAM171BQ6P995 826 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 FRMD5Q7Z6J6 570 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 ZDHHC14Q8IZN3 488 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 TTC9BQ8N6N2 239 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 MLKLQ8NB16 471 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 SPPL2BQ8TCT7 592 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 TAS1R2Q8TE23 839 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 MED15Q96RN5 788 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 MMS19Q96T76 1030 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 MRPL45Q9BRJ2 306 aaKnown RBP13.34□□□□□ -0.27
DDB2-213ENST00000617847 METTL14Q9HCE5 456 aaKnown RBP13.34□□□□□ -0.27
DDB2-213ENST00000617847 CDH9Q9ULB4 789 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 POLIQ9UNA4 740 aa13.34□□□□□ -0.27
DDB2-213ENST00000617847 STX10O60499 249 aa13.33□□□□□ -0.28
DDB2-213ENST00000617847 N4BP1O75113 896 aaKnown RBP13.33□□□□□ -0.28
DDB2-213ENST00000617847 ACAT1P24752 427 aaKnown RBP13.33□□□□□ -0.28
DDB2-213ENST00000617847 LMO2P25791 158 aa13.33□□□□□ -0.28
DDB2-213ENST00000617847 PIK3CAP42336 1068 aa13.33□□□□□ -0.28
DDB2-213ENST00000617847 MXI1P50539 228 aa13.33□□□□□ -0.28
DDB2-213ENST00000617847 MARSP56192 900 aaKnown RBP13.33□□□□□ -0.28
DDB2-213ENST00000617847 STX17P56962 302 aa13.33□□□□□ -0.28
DDB2-213ENST00000617847 NTHL1P78549 312 aa13.33□□□□□ -0.28
DDB2-213ENST00000617847 TWF1Q12792 350 aa13.33□□□□□ -0.28
DDB2-213ENST00000617847 NFE2Q16621 373 aaPredicted RBP13.33□□□□□ -0.28
DDB2-213ENST00000617847 OTOP3Q7RTS5 596 aa13.33□□□□□ -0.28
DDB2-213ENST00000617847 RNF135Q8IUD6 432 aa13.33□□□□□ -0.28
DDB2-213ENST00000617847 PLCD3Q8N3E9 789 aa13.33□□□□□ -0.28
DDB2-213ENST00000617847 TDRD5Q8NAT2 981 aaKnown RBP13.33□□□□□ -0.28
DDB2-213ENST00000617847 KHSRPQ92945 711 aaKnown RBP eCLIP13.33□□□□□ -0.28
DDB2-213ENST00000617847 SLC35C1Q96A29 364 aa13.33□□□□□ -0.28
DDB2-213ENST00000617847 DNAJC25Q9H1X3 360 aa13.33□□□□□ -0.28
DDB2-213ENST00000617847 HCFC1R1Q9NWW0 138 aa13.33□□□□□ -0.28
DDB2-213ENST00000617847 CEP72Q9P209 647 aa13.33□□□□□ -0.28
DDB2-213ENST00000617847 NXF1Q9UBU9 619 aaKnown RBP13.33□□□□□ -0.28
DDB2-213ENST00000617847 ARMCX3Q9UH62 379 aaPredicted RBP13.33□□□□□ -0.28
DDB2-213ENST00000617847 RWDD2AQ9UIY3 292 aa13.33□□□□□ -0.28
DDB2-213ENST00000617847 SLC27A5Q9Y2P5 690 aa13.33□□□□□ -0.28
DDB2-213ENST00000617847 COQ4Q9Y3A0 265 aa13.33□□□□□ -0.28
DDB2-213ENST00000617847 MBD3O95983 291 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 RHOP08100 348 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 HAPLN1P10915 354 aaPredicted RBP13.32□□□□□ -0.28
DDB2-213ENST00000617847 PTPN2P17706 415 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 SP100P23497 879 aaPredicted RBP13.32□□□□□ -0.28
DDB2-213ENST00000617847 TUFMP49411 452 aaKnown RBP13.32□□□□□ -0.28
DDB2-213ENST00000617847 EPHA5P54756 1037 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 NLRP12P59046 1061 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 PLD1Q13393 1074 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 SEMA4DQ92854 862 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 ELMO3Q96BJ8 720 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 MYADMQ96S97 322 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 SYT15Q9BQS2 421 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 SDCBP2Q9H190 292 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 SMYD3Q9H7B4 428 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 MMRN2Q9H8L6 949 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 APOBEC3GQ9HC16 384 aaKnown RBP13.32□□□□□ -0.28
DDB2-213ENST00000617847 ABCB6Q9NP58 842 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 CRTAC1Q9NQ79 661 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 GTF3C4Q9UKN8 822 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 PCDHB5Q9Y5E4 795 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 PTPRDP23468 1912 aa13.32□□□□□ -0.28
DDB2-213ENST00000617847 MYBPHLA2RUH7 354 aa13.31□□□□□ -0.28
DDB2-213ENST00000617847 PMM2O15305 246 aa13.31□□□□□ -0.28
DDB2-213ENST00000617847 LRRN2O75325 713 aa13.31□□□□□ -0.28
DDB2-213ENST00000617847 GNA14O95837 355 aa13.31□□□□□ -0.28
DDB2-213ENST00000617847 FSHRP23945 695 aa13.31□□□□□ -0.28
DDB2-213ENST00000617847 GNL1P36915 607 aaPredicted RBP13.31□□□□□ -0.28
DDB2-213ENST00000617847 NOP14P78316 857 aaKnown RBP13.31□□□□□ -0.28
DDB2-213ENST00000617847 CCDC142Q17RM4 750 aa13.31□□□□□ -0.28
DDB2-213ENST00000617847 DPCR1Q3MIW9 517 aa13.31□□□□□ -0.28
DDB2-213ENST00000617847 CBWD6Q4V339 395 aa13.31□□□□□ -0.28
DDB2-213ENST00000617847 PABPC1LQ4VXU2 614 aaKnown RBP13.31□□□□□ -0.28
DDB2-213ENST00000617847 DCAF17Q5H9S7 520 aaPredicted RBP13.31□□□□□ -0.28
DDB2-213ENST00000617847 CBWD3Q5JTY5 395 aa13.31□□□□□ -0.28
DDB2-213ENST00000617847 PRSS36Q5K4E3 855 aa13.31□□□□□ -0.28
DDB2-213ENST00000617847 CBWD5Q5RIA9 395 aa13.31□□□□□ -0.28
DDB2-213ENST00000617847 SPOPLQ6IQ16 392 aa13.31□□□□□ -0.28
DDB2-213ENST00000617847 OR6B3Q8NGW1 331 aa13.31□□□□□ -0.28
DDB2-213ENST00000617847 ACSF2Q96CM8 615 aaPredicted RBP13.31□□□□□ -0.28
DDB2-213ENST00000617847 FUBP3Q96I24 572 aaKnown RBP eCLIP13.31□□□□□ -0.28
DDB2-213ENST00000617847 FAXDC2Q96IV6 333 aa13.31□□□□□ -0.28
DDB2-213ENST00000617847 PI4K2AQ9BTU6 479 aa13.31□□□□□ -0.28
DDB2-213ENST00000617847 SRRTQ9BXP5 876 aaKnown RBP13.31□□□□□ -0.28
DDB2-213ENST00000617847 LRRC3Q9BY71 257 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms