RNA–Protein interactions for RNA: ENST00000617777.1

LINC00598-208, long intergenic non-protein coding RNA 598, humanhuman

TSL 2 BASIC

Gene LINC00598, Length 2,551 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-208ENST00000617777 PDCL2Q8N4E4 241 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 RNF10Q8N5U6 811 aaKnown RBP8.53□□□□□ -1.04
LINC00598-208ENST00000617777 ST7Q9NRC1 585 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 TMEM161AQ9NX61 479 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 TBX21Q9UL17 535 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 INTUQ9ULD6 942 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 NME7Q9Y5B8 376 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 RIOK3O14730 519 aaKnown RBP8.53□□□□□ -1.04
LINC00598-208ENST00000617777 SRGAP2O75044 1071 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 CYP1A1P04798 512 aaPredicted RBP8.53□□□□□ -1.04
LINC00598-208ENST00000617777 ITGB1P05556 798 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 VDRP11473 427 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 RRM1P23921 792 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 ITGB8P26012 769 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 RPL9P32969 192 aaKnown RBP8.53□□□□□ -1.04
LINC00598-208ENST00000617777 NOMO3P69849 1222 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 INCA1Q0VD86 236 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 TIGD5Q53EQ6 642 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 C1orf53Q5VUE5 145 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.53□□□□□ -1.04
LINC00598-208ENST00000617777 MCOLN2Q8IZK6 566 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 TMEM35BQ8NCS4 154 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 KBTBD7Q8WVZ9 684 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 RFFLQ8WZ73 363 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 APBB2Q92870 758 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 FAXDC2Q96IV6 333 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 BTBD6Q96KE9 485 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 NUP85Q9BW27 656 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 SYNCQ9H7C4 482 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 TBC1D13Q9NVG8 400 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 GDAP2Q9NXN4 497 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 DNAJB4Q9UDY4 337 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 COG5Q9UP83 839 aa8.53□□□□□ -1.04
LINC00598-208ENST00000617777 PDCD11Q14690 1871 aaKnown RBP8.53□□□□□ -1.04
LINC00598-208ENST00000617777 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.52□□□□□ -1.05
LINC00598-208ENST00000617777 GRID2IPA4D2P6 1211 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 TRIM43BA6NCK2 446 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 TBKBP1A7MCY6 615 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 B4GALT3O60512 393 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 ATP2C2O75185 946 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 MICAL2O94851 1124 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 ACRP10323 421 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 CSF2RAP15509 400 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 ADORA2BP29275 332 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 CXCR5P32302 372 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 CENPCQ03188 943 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 IKBKEQ14164 716 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 IFI16Q16666 785 aaKnown RBP8.52□□□□□ -1.05
LINC00598-208ENST00000617777 CCDC142Q17RM4 750 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 PPP1R26Q5T8A7 1209 aaPredicted RBP8.52□□□□□ -1.05
LINC00598-208ENST00000617777 CYP4A22Q5TCH4 519 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 TRIM72Q6ZMU5 477 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 TMCO2Q7Z6W1 182 aaPredicted RBP8.52□□□□□ -1.05
LINC00598-208ENST00000617777 OSTM1Q86WC4 334 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 ERICH1Q86X53 443 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 TTC39CQ8N584 583 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 WDTC1Q8N5D0 677 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 TRIM43Q96BQ3 446 aaPredicted RBP8.52□□□□□ -1.05
LINC00598-208ENST00000617777 HCSTQ9UBK5 93 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 TSPAN16Q9UKR8 245 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 STXBP5LQ9Y2K9 1186 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 TDRD15B5MCY1 1934 aaKnown RBP8.52□□□□□ -1.05
LINC00598-208ENST00000617777 KIF4AO95239 1232 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 GJB6O95452 261 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 CCDC130P13994 396 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 PBX3P40426 434 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 BCAR1P56945 870 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 MESDQ14696 234 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 GOLGA7BQ2TAP0 167 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 TOP6BLQ8N6T0 577 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 TPCN2Q8NHX9 752 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 DDX27Q96GQ7 796 aaKnown RBP8.52□□□□□ -1.05
LINC00598-208ENST00000617777 CAPZA3Q96KX2 299 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 DDX43Q9NXZ2 648 aaKnown RBP8.52□□□□□ -1.05
LINC00598-208ENST00000617777 JRKLQ9Y4A0 524 aa8.52□□□□□ -1.05
LINC00598-208ENST00000617777 LAMA2P24043 3122 aaKnown RBP8.51□□□□□ -1.05
LINC00598-208ENST00000617777 NT5C1B-RDH14C9J2C7 533 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 GOLGA8SH3BPF8 625 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 O00370 1275 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 BUB1BO60566 1050 aaPredicted RBP8.51□□□□□ -1.05
LINC00598-208ENST00000617777 CXCL10P02778 98 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 RGS7P49802 495 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 CNGA2Q16280 664 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 LIN9Q5TKA1 542 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 RHOT2Q8IXI1 618 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 ZNF564Q8TBZ8 553 aaPredicted RBP8.51□□□□□ -1.05
LINC00598-208ENST00000617777 KANSL3Q9P2N6 904 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 HESX1Q9UBX0 185 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 TJP2Q9UDY2 1190 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 CYTH4Q9UIA0 394 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 GTF3C4Q9UKN8 822 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 PCDHGC3Q9UN70 934 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.51□□□□□ -1.05
LINC00598-208ENST00000617777 A0A0A6YYK5 440 aaPredicted RBP8.51□□□□□ -1.05
LINC00598-208ENST00000617777 BTNL10A8MVZ5 291 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 TADA2AO75478 443 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 PARNO95453 639 aaKnown RBP8.51□□□□□ -1.05
LINC00598-208ENST00000617777 TIMP1P01033 207 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 DCLRE1AQ6PJP8 1040 aa8.51□□□□□ -1.05
LINC00598-208ENST00000617777 MON1BQ7L1V2 547 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms