RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 PAFAH2Q99487 392 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 FSD1LQ9BXM9 530 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 LRMDAQ9H2I8 198 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 TIMMDC1Q9NPL8 285 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 METTL5Q9NRN9 209 aaKnown RBP10.71□□□□□ -0.69
CUL4A-212ENST00000617546 RBAKQ9NYW8 714 aaPredicted RBP10.71□□□□□ -0.69
CUL4A-212ENST00000617546 AGO2Q9UKV8 859 aaKnown RBP10.71□□□□□ -0.69
CUL4A-212ENST00000617546 TMEM247A6NEH6 219 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 USP17L15C9J2P7 530 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 USP17L13C9JLJ4 530 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 USP17L11C9JVI0 530 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 USP17L18D6R9N7 530 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 USP17L22D6RA61 530 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 USP17L17D6RBQ6 530 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 USP17L19D6RCP7 530 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 USP17L20D6RJB6 530 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 PPEF1O14829 653 aaPredicted RBP10.71□□□□□ -0.7
CUL4A-212ENST00000617546 MYBP10242 640 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 MYL4P12829 197 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 PBX1P40424 430 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 RPL5P46777 297 aaKnown RBP10.71□□□□□ -0.7
CUL4A-212ENST00000617546 GSCP56915 257 aaPredicted RBP10.71□□□□□ -0.7
CUL4A-212ENST00000617546 PLOD1Q02809 727 aaPredicted RBP10.71□□□□□ -0.7
CUL4A-212ENST00000617546 ZNF543Q08ER8 600 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 USP17L24Q0WX57 530 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 SNX17Q15036 470 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 Q4G0T1 1027 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 USP17L6PQ6QN14 398 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 MYRFQ9Y2G1 1151 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 SEC24DO94855 1032 aaPredicted RBP10.71□□□□□ -0.7
CUL4A-212ENST00000617546 NUDT2P50583 147 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 GRM1Q13255 1194 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 BLMHQ13867 455 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 TTC27Q6P3X3 843 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 SCFD1Q8WVM8 642 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 RMND5BQ96G75 393 aaPredicted RBP10.71□□□□□ -0.7
CUL4A-212ENST00000617546 CNDP1Q96KN2 507 aa10.71□□□□□ -0.7
CUL4A-212ENST00000617546 DEPDC5O75140 1603 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 AP1G2O75843 785 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 C4BPBP20851 252 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 RUNX1T1Q06455 604 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 FAM102AQ5T9C2 384 aaPredicted RBP10.7□□□□□ -0.7
CUL4A-212ENST00000617546 GOLPH3Q9H4A6 298 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 VTI1BQ9UEU0 232 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 PCSK1NQ9UHG2 260 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 CPSF3Q9UKF6 684 aaKnown RBP10.7□□□□□ -0.7
CUL4A-212ENST00000617546 HOXA13P31271 388 aaPredicted RBP10.7□□□□□ -0.7
CUL4A-212ENST00000617546 MMP13P45452 471 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 PTDSS1P48651 473 aaKnown RBP10.7□□□□□ -0.7
CUL4A-212ENST00000617546 SNRNP35Q16560 246 aaKnown RBP10.7□□□□□ -0.7
CUL4A-212ENST00000617546 C1orf228Q6PIY5 440 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 SCARA5Q6ZMJ2 495 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 ZNF786Q8N393 782 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 LENG1Q96BZ8 264 aaPredicted RBP10.7□□□□□ -0.7
CUL4A-212ENST00000617546 TMEM237Q96Q45 408 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 C1orf50Q9BV19 199 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 UNC45AQ9H3U1 944 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 PCDHA3Q9Y5H8 950 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 SYNJ2BP-COX16A0A087WUM0 186 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 FCHO1O14526 889 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 RASSF9O75901 435 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 MAPTP10636 758 aaKnown RBP10.7□□□□□ -0.7
CUL4A-212ENST00000617546 EPHB2P29323 1055 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 CIITAP33076 1130 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 NR1H2P55055 460 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 UBXN2AP68543 259 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 NDUFA5Q16718 116 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 SGSM1Q2NKQ1 1148 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 COX16Q9P0S2 106 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 RSL24D1Q9UHA3 163 aaKnown RBP10.7□□□□□ -0.7
CUL4A-212ENST00000617546 WDR47O94967 919 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 STKLD1Q8NE28 680 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 RIT2Q99578 217 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 RBBP8Q99708 897 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 THAP1Q9NVV9 213 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 MARCOQ9UEW3 520 aaPredicted RBP10.7□□□□□ -0.7
CUL4A-212ENST00000617546 ADGRB1O14514 1584 aa10.7□□□□□ -0.7
CUL4A-212ENST00000617546 UBAP1LF5GYI3 381 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 DNALI1O14645 258 aaPredicted RBP10.69□□□□□ -0.7
CUL4A-212ENST00000617546 CYP27B1O15528 508 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 MGRN1O60291 552 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 SCNN1DP51172 638 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 C21orf59P57076 290 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 PURAQ00577 322 aaKnown RBP10.69□□□□□ -0.7
CUL4A-212ENST00000617546 ACVR2BQ13705 512 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 ZBTB33Q86T24 672 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 TMEM139Q8IV31 216 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 VWDEQ8N2E2 1590 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 DCLK3Q9C098 648 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 GPAMQ9HCL2 828 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 INTS13Q9NVM9 706 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 PROSCO94903 275 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 OCM2P0CE71 109 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 OCMP0CE72 109 aaPredicted RBP10.69□□□□□ -0.7
CUL4A-212ENST00000617546 RPL21P46778 160 aaKnown RBP10.69□□□□□ -0.7
CUL4A-212ENST00000617546 CPA2P48052 419 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 AQP5P55064 265 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 SLC12A1Q13621 1099 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 TFDP3Q5H9I0 405 aa10.69□□□□□ -0.7
CUL4A-212ENST00000617546 RDM1Q8NG50 284 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms