RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 TXNRD3NBQ6F5E7 133 aa15.28■□□□□ 0.04
SHROOM1-208ENST00000617339 SLC13A5Q86YT5 568 aaPredicted RBP15.28■□□□□ 0.04
SHROOM1-208ENST00000617339 MYPNQ86TC9 1320 aa15.27■□□□□ 0.04
SHROOM1-208ENST00000617339 F5H423 210 aaPredicted RBP15.27■□□□□ 0.04
SHROOM1-208ENST00000617339 ITGB3P05106 788 aa15.27■□□□□ 0.04
SHROOM1-208ENST00000617339 MYL3P08590 195 aa15.27■□□□□ 0.04
SHROOM1-208ENST00000617339 IQCF3P0C7M6 154 aa15.27■□□□□ 0.04
SHROOM1-208ENST00000617339 CREB1P16220 341 aa15.27■□□□□ 0.04
SHROOM1-208ENST00000617339 RGS7P49802 495 aa15.27■□□□□ 0.04
SHROOM1-208ENST00000617339 NFIL3Q16649 462 aa15.27■□□□□ 0.04
SHROOM1-208ENST00000617339 ATF7IP2Q5U623 682 aa15.27■□□□□ 0.04
SHROOM1-208ENST00000617339 TLCD1Q96CP7 247 aa15.27■□□□□ 0.04
SHROOM1-208ENST00000617339 C9orf72Q96LT7 481 aa15.27■□□□□ 0.04
SHROOM1-208ENST00000617339 GPR20Q99678 358 aa15.27■□□□□ 0.04
SHROOM1-208ENST00000617339 PAIP2Q9BPZ3 127 aaKnown RBP15.27■□□□□ 0.04
SHROOM1-208ENST00000617339 DDX23Q9BUQ8 820 aaKnown RBP15.27■□□□□ 0.04
SHROOM1-208ENST00000617339 FAM114A2Q9NRY5 505 aa15.27■□□□□ 0.04
SHROOM1-208ENST00000617339 CISHQ9NSE2 258 aa15.27■□□□□ 0.04
SHROOM1-208ENST00000617339 ZNF148Q9UQR1 794 aa15.27■□□□□ 0.04
SHROOM1-208ENST00000617339 A0A0A6YYK5 440 aaPredicted RBP15.27■□□□□ 0.03
SHROOM1-208ENST00000617339 SNUPNO95149 360 aaKnown RBP15.27■□□□□ 0.03
SHROOM1-208ENST00000617339 LINGO3P0C6S8 592 aa15.27■□□□□ 0.03
SHROOM1-208ENST00000617339 KRT17Q04695 432 aa15.27■□□□□ 0.03
SHROOM1-208ENST00000617339 ADCY2Q08462 1091 aa15.27■□□□□ 0.03
SHROOM1-208ENST00000617339 XRRA1Q6P2D8 792 aa15.27■□□□□ 0.03
SHROOM1-208ENST00000617339 DNERQ8NFT8 737 aa15.27■□□□□ 0.03
SHROOM1-208ENST00000617339 TMC2Q8TDI7 906 aa15.27■□□□□ 0.03
SHROOM1-208ENST00000617339 C12orf42Q96LP6 360 aa15.27■□□□□ 0.03
SHROOM1-208ENST00000617339 LPIN3Q9BQK8 851 aa15.27■□□□□ 0.03
SHROOM1-208ENST00000617339 RAB17Q9H0T7 212 aa15.27■□□□□ 0.03
SHROOM1-208ENST00000617339 ETAA1Q9NY74 926 aa15.27■□□□□ 0.03
SHROOM1-208ENST00000617339 GTF3C4Q9UKN8 822 aa15.27■□□□□ 0.03
SHROOM1-208ENST00000617339 A0A0B4J269 797 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 GNAT1P11488 350 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 MSH2P43246 934 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 SESN3P58005 492 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 LONRF1Q17RB8 773 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 LIN9Q5TKA1 542 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 SCYL2Q6P3W7 929 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 PIGWQ7Z7B1 504 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 CCHCR1Q8TD31 782 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 NAP1L3Q99457 506 aaPredicted RBP15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 SGIP1Q9BQI5 828 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 PDLIM7Q9NR12 457 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 KLK14Q9P0G3 267 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 RASAL2Q9UJF2 1139 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 INTUQ9ULD6 942 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 P4HA2O15460 535 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 GRIN3BO60391 1043 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 CSPG5O95196 566 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 ADORA2AP29274 412 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 ARL2P36404 184 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 NRLP54845 237 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 DUOXA2Q1HG44 320 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 SLFN12LQ6IEE8 588 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 ARMCX2Q7L311 632 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 DDX1Q92499 740 aaKnown RBP15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 TSC22D3Q99576 134 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 ADAM7Q9H2U9 754 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 SETD4Q9NVD3 440 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 SYNJ2BP-COX16A0A087WUM0 186 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 ASAP2O43150 1006 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 GSTA1P08263 222 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 NFICP08651 508 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 CCND1P24385 295 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 MYBPC2Q14324 1141 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 ITIH4Q14624 930 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 KYNUQ16719 465 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 RDM1Q8NG50 284 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 TFAP2BQ92481 460 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 HEXIM2Q96MH2 286 aaKnown RBP15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 TIPINQ9BVW5 301 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 CXCL16Q9H2A7 254 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 NMRK2Q9NPI5 230 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 COX16Q9P0S2 106 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 ZFATQ9P243 1243 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 PARP2Q9UGN5 583 aa15.26■□□□□ 0.03
SHROOM1-208ENST00000617339 TNPO2O14787 897 aaKnown RBP15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 COPS2P61201 443 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 ZNF268Q14587 947 aaPredicted RBP15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 PSMD6Q15008 389 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 C12orf56Q8IXR9 622 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 PIDD1Q9HB75 910 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 DPPA5A6NC42 116 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 SPDYE5A6NIY4 337 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 TOM1L1O75674 476 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 ECEL1O95672 775 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 CTSHP09668 335 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 PTENP60484 403 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 FAM47EQ6ZV65 393 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 ZNF365Q70YC5 407 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 NETO2Q8NC67 525 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 RPF1Q9H9Y2 349 aaKnown RBP15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 C17orf75Q9HAS0 396 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 ETNK1Q9HBU6 452 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 FAM49BQ9NUQ9 324 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 HMGXB4Q9UGU5 601 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 ZMYND8Q9ULU4 1186 aaPredicted RBP15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 AGTPBP1Q9UPW5 1226 aa15.25■□□□□ 0.03
SHROOM1-208ENST00000617339 USP15Q9Y4E8 981 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms