RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 MYO7AQ13402 2215 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 GTPBP10A4D1E9 387 aaKnown RBP14.17□□□□□ -0.14
MDC1-209ENST00000613547 GOLGA6L19H0YKK7 550 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 TBX10O75333 385 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 OR4Q2P0C623 313 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 YWHAEP62258 255 aaKnown RBP14.17□□□□□ -0.14
MDC1-209ENST00000613547 RBM10P98175 930 aaKnown RBP14.17□□□□□ -0.14
MDC1-209ENST00000613547 LRMPQ12912 555 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 NCAPHQ15003 741 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 UVSSAQ2YD98 709 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 SLC39A12Q504Y0 691 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 INTS6LQ5JSJ4 861 aaKnown RBP14.17□□□□□ -0.14
MDC1-209ENST00000613547 PPM1LQ5SGD2 360 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 FKBP15Q5T1M5 1219 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 OSTM1Q86WC4 334 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 EHBP1Q8NDI1 1231 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 C2orf15Q8WU43 125 aaKnown RBP14.17□□□□□ -0.14
MDC1-209ENST00000613547 RTP3Q9BQQ7 232 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 SYT15Q9BQS2 421 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 BCO2Q9BYV7 579 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 INTS2Q9H0H0 1204 aaKnown RBP14.17□□□□□ -0.14
MDC1-209ENST00000613547 CYP4F11Q9HBI6 524 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 ZDHHC7Q9NXF8 308 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 CLEC1BQ9P126 229 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 CD207Q9UJ71 328 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 FAM50BQ9Y247 325 aa14.17□□□□□ -0.14
MDC1-209ENST00000613547 H3BQ06 376 aaPredicted RBP14.16□□□□□ -0.14
MDC1-209ENST00000613547 ZMYND10O75800 440 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 C8AP07357 584 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 PDGFRBP09619 1106 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 HNRNPA1P09651 372 aaKnown RBP eCLIP14.16□□□□□ -0.14
MDC1-209ENST00000613547 WEE2P0C1S8 567 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 ACAT1P24752 427 aaKnown RBP14.16□□□□□ -0.14
MDC1-209ENST00000613547 LTBRP36941 435 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 RAP1GAPP47736 663 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 CDH8P55286 799 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 ITIH3Q06033 890 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 ADCY1Q08828 1119 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 CUL2Q13617 745 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 KRT31Q15323 416 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 EXOC3L4Q17RC7 722 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 PUS10Q3MIT2 529 aaKnown RBP14.16□□□□□ -0.14
MDC1-209ENST00000613547 CES5AQ6NT32 575 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 LRSAM1Q6UWE0 723 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 RNF19BQ6ZMZ0 732 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 C4orf50Q6ZRC1 276 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 UNC93AQ86WB7 457 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 DHX40Q8IX18 779 aaKnown RBP14.16□□□□□ -0.14
MDC1-209ENST00000613547 TCEAL8Q8IYN2 117 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 PPM1KQ8N3J5 372 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 CMASQ8NFW8 434 aaPredicted RBP14.16□□□□□ -0.14
MDC1-209ENST00000613547 SLC7A14Q8TBB6 771 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 FAM200AQ8TCP9 573 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 SPPL2BQ8TCT7 592 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 ELMO3Q96BJ8 720 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 FAM81BQ96LP2 452 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 PGLYRP2Q96PD5 576 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 TSPY26PQ9H489 355 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 APOBEC3GQ9HC16 384 aaKnown RBP14.16□□□□□ -0.14
MDC1-209ENST00000613547 CBX8Q9HC52 389 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 TAB2Q9NYJ8 693 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 HSFX1Q9UBD0 423 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 PCDHB5Q9Y5E4 795 aa14.16□□□□□ -0.14
MDC1-209ENST00000613547 MTMR11A4FU01 709 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 XYLBO75191 536 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 LRRN2O75325 713 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 LRG1P02750 347 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 ZNF18P17022 549 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 CD58P19256 250 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 LMO2P25791 158 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 HOXA9P31269 272 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 DLX2Q07687 328 aaPredicted RBP14.15□□□□□ -0.14
MDC1-209ENST00000613547 PLD1Q13393 1074 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 LEXMQ3ZCV2 418 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 MIIPQ5JXC2 388 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 RARS2Q5T160 578 aaKnown RBP14.15□□□□□ -0.14
MDC1-209ENST00000613547 CYP26C1Q6V0L0 522 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 SPATA2LQ8IUW3 424 aaPredicted RBP14.15□□□□□ -0.14
MDC1-209ENST00000613547 ELMOD1Q8N336 334 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 ATXN2LQ8WWM7 1075 aaKnown RBP14.15□□□□□ -0.14
MDC1-209ENST00000613547 MSLNLQ96KJ4 702 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 RIPOR3Q96MK2 946 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 TMEM209Q96SK2 561 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 NT5C1AQ9BXI3 368 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 SDCBP2Q9H190 292 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 VPS16Q9H269 839 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 PIDD1Q9HB75 910 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 ABI2Q9NYB9 513 aaPredicted RBP14.15□□□□□ -0.14
MDC1-209ENST00000613547 LIMA1Q9UHB6 759 aaKnown RBP14.15□□□□□ -0.14
MDC1-209ENST00000613547 GTF3C4Q9UKN8 822 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 SCN1AP35498 2009 aa14.15□□□□□ -0.14
MDC1-209ENST00000613547 ATP8B3O60423 1300 aa14.15□□□□□ -0.15
MDC1-209ENST00000613547 CCDC195A0A1B0GUA6 201 aa14.14□□□□□ -0.15
MDC1-209ENST00000613547 PTPN1P18031 435 aaKnown RBP14.14□□□□□ -0.15
MDC1-209ENST00000613547 ALDH1A3P47895 512 aa14.14□□□□□ -0.15
MDC1-209ENST00000613547 TUFMP49411 452 aaKnown RBP14.14□□□□□ -0.15
MDC1-209ENST00000613547 NDST1P52848 882 aa14.14□□□□□ -0.15
MDC1-209ENST00000613547 COPB1P53618 953 aaKnown RBP14.14□□□□□ -0.15
MDC1-209ENST00000613547 PSMC1P62191 440 aaKnown RBP14.14□□□□□ -0.15
MDC1-209ENST00000613547 MRPS5P82675 430 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms