RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 TERB1Q8NA31 727 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 C20orf96Q9NUD7 363 aaPredicted RBP18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 APPL1Q9UKG1 709 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 RNF17Q9BXT8 1623 aaKnown RBP18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 B2RBV5 119 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 M0R3G1 203 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 GTF2H1P32780 548 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 SLC20A2Q08357 652 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 YAF2Q8IY57 180 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 CAB39Q9Y376 341 aaPredicted RBP18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 ARIH2O95376 493 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 CSF1RP07333 972 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 STX5Q13190 355 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 MOXD1Q6UVY6 613 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 FAM162AQ96A26 154 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 VCPKMTQ9H867 229 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 PSMA3P25788 255 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 ITGA8P53708 1063 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 CD302Q8IX05 232 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 PPP2R3CQ969Q6 453 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 OTUD5Q96G74 571 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 ATXN7L3BQ96GX2 97 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 SH3GL2Q99962 352 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 AGPAT5Q9NUQ2 364 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 RRN3P2A6NIE6 340 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 STK4Q13043 487 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 MAPRE1Q15691 268 aaKnown RBP18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 LRRC36Q1X8D7 754 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 C6orf10Q5SRN2 563 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 RAD9BQ6WBX8 426 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 C3orf62Q6ZUJ4 267 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 PLEKHM3Q6ZWE6 761 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 PRPF39Q86UA1 669 aaKnown RBP18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 C4orf33Q8N1A6 199 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 SLC30A5Q8TAD4 765 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 SPATA18Q8TC71 538 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 NOD2Q9HC29 1040 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 KIAA1257Q9ULG3 409 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 ALG6Q9Y672 507 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 NR3C2P08235 984 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 ATF7IP2Q5U623 682 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 HORMAD1Q86X24 394 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 NUP93Q8N1F7 819 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 TBC1D16Q8TBP0 767 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 C9orf72Q96LT7 481 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 ZNRF3Q9ULT6 936 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 ATF5Q9Y2D1 282 aaPredicted RBP18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 RSPH10B2B2RC85 870 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 HBP1O60381 514 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 ZC3H11AO75152 810 aaKnown RBP eCLIP18.15■□□□□ 0.51e-6■■■■■ 33.1
HMGXB3-206ENST00000613459 RSPH10BP0C881 870 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 SLC2A3P11169 496 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 BLVRAP53004 296 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 TMEM161AQ9NX61 479 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 PKP3Q9Y446 797 aa18.15■□□□□ 0.5
HMGXB3-206ENST00000613459 CNTNAP5Q8WYK1 1306 aa18.14■□□□□ 0.5
HMGXB3-206ENST00000613459 UNC13BO14795 1591 aa18.14■□□□□ 0.5
HMGXB3-206ENST00000613459 MYBP10242 640 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 SCARF1Q14162 830 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 SPDYAQ5MJ70 313 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 DDX42Q86XP3 938 aaKnown RBP eCLIP18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 UBTFL6P0CB48 400 aaPredicted RBP18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 AARS2Q5JTZ9 985 aaKnown RBP18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 LVRNQ6Q4G3 990 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 GPRASP2Q96D09 838 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 ABHD8Q96I13 439 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 PLEKHA8Q96JA3 519 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 POLD4Q9HCU8 107 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 GIMAP4Q9NUV9 329 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 CD274Q9NZQ7 290 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 CHMP2BQ9UQN3 213 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 KANSL1LA0AUZ9 987 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 KRT87PA6NCN2 255 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 EVPLLA8MZ36 301 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 MAP3K13O43283 966 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 GYPCP04921 128 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 CCDC15Q0P6D6 951 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 PPP1R36Q96LQ0 422 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 SOAT2O75908 522 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 KRR1Q13601 381 aaKnown RBP18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 ARHGEF7Q14155 803 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 ACAD10Q6JQN1 1059 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 MTIF3Q9H2K0 278 aaKnown RBP18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 TUBGCP4Q9UGJ1 667 aa18.14■□□□□ 0.49
HMGXB3-206ENST00000613459 SUPT3HB4E1H0 165 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 GLRA3O75311 464 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 LMBRD2Q68DH5 695 aaPredicted RBP18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 ZNF280CQ8ND82 737 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 SPATA17Q96L03 361 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 H2AFY2Q9P0M6 372 aaPredicted RBP18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 TSPOAP1O95153 1857 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 ACOT2P49753 483 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 BAATQ14032 418 aaPredicted RBP18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 FIGNQ5HY92 759 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 ZNF34Q8IZ26 560 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 SLC7A14Q8TBB6 771 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 NAT9Q9BTE0 207 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 PRR12Q9ULL5 1215 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 PDHBP11177 359 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms