RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 FAM227BQ96M60 508 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ZNF717Q9BY31 904 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 AVENQ9NQS1 362 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 RBMX2Q9Y388 322 aaKnown RBP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 PPRC1Q5VV67 1664 aaKnown RBP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 TEX33O43247 280 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 EXTL3O43909 919 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 KATNA1O75449 491 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 IQCKQ8N0W5 287 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ASPSCR1Q9BZE9 553 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 DCLK3Q9C098 648 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ANKHQ9HCJ1 492 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 TMEM5Q9Y2B1 443 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 UGT1A9O60656 530 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 UGT1A6P19224 532 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 UGT1A1P22309 533 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 UGT1A4P22310 534 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 UGT1A3P35503 534 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 UGT1A5P35504 534 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 PGDP52209 483 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 MEI1Q5TIA1 1274 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ZNF544Q6NX49 715 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 IFNL1Q8IU54 200 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 UGT1A7Q9HAW7 530 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 UGT1A10Q9HAW8 530 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 UGT1A8Q9HAW9 530 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 TOM1O60784 492 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 TOMM70O94826 608 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 BCAP31P51572 246 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 USP11P51784 963 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 XKRXQ6PP77 449 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 PRUNE1Q86TP1 453 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 CNDP1Q96KN2 507 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 FRMD8Q9BZ67 464 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 DNM3Q9UQ16 869 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 SOS2Q07890 1332 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 PJA2O43164 708 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 AKAP10O43572 662 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 COPZ1P61923 177 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 PTH1RQ03431 593 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 RAD51Q06609 339 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ENPEPQ07075 957 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 SLC29A2Q14542 456 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 NCAPHQ15003 741 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 PDCD6IPQ8WUM4 868 aaKnown RBP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ZNF570Q96NI8 536 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 DDX47Q9H0S4 455 aaKnown RBP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ZSCAN5BA6NJL1 495 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 SNAP25P60880 206 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 PPP2R5DQ14738 602 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 CFAP70Q5T0N1 1121 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 ZBED8Q8IZ13 594 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 TMIEQ8NEW7 156 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 CDCA5Q96FF9 252 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 NGLY1Q96IV0 654 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 MKNK2Q9HBH9 465 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 COL4A3BPQ9Y5P4 624 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 PTPREP23469 700 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 GTF2H1P32780 548 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 IL15P40933 162 aaPredicted RBP5.15□□□□□ -1.58
VPS13D-213ENST00000613099 MARSP56192 900 aaKnown RBP5.15□□□□□ -1.58
VPS13D-213ENST00000613099 COBLL1Q53SF7 1204 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 RORBQ92753 470 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 IGSF9Q9P2J2 1179 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 PCDH11YQ9BZA8 1340 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 DEPDC5O75140 1603 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 DIP2CQ9Y2E4 1556 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 SGK1O00141 431 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 NCAM2O15394 837 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 ENDOUP21128 410 aaKnown RBP5.15□□□□□ -1.58
VPS13D-213ENST00000613099 XPAP23025 273 aaPredicted RBP5.15□□□□□ -1.58
VPS13D-213ENST00000613099 LGALS3BPQ08380 585 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 COX10Q12887 443 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 DPYSQ14117 519 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 ANO7Q6IWH7 933 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 LRRC8EQ6NSJ5 796 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 FAM45BPQ6NSW5 357 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 RAB44Q7Z6P3 723 aaPredicted RBP5.15□□□□□ -1.58
VPS13D-213ENST00000613099 CCNJLQ8IV13 435 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 FAM178BQ8IXR5 827 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 ELMOD2Q8IZ81 293 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.15□□□□□ -1.58
VPS13D-213ENST00000613099 PCYOX1LQ8NBM8 494 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 WDR36Q8NI36 951 aaKnown RBP5.15□□□□□ -1.58
VPS13D-213ENST00000613099 PHF21AQ96BD5 680 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 ANKRD36CQ5JPF3 1778 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 C15orf38-AP3S2A0A0A6YYH1 394 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 BTBD11A6QL63 1104 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 PSMD11O00231 422 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 NCK2O43639 380 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 IFNA7P01567 189 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 ETV3P41162 512 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 ARPINQ7Z6K5 226 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 HIPK3Q9H422 1215 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 GMIPQ9P107 970 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 KPNA7A9QM74 516 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 E9PBE3 544 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 EYA4O95677 639 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 ABCB1P08183 1280 aaPredicted RBP5.15□□□□□ -1.58
VPS13D-213ENST00000613099 CCNE1P24864 410 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms