RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 H0Y858 1186 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 STK25O00506 426 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 GABRDO14764 452 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 FGF19O95750 216 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 HAPLN1P10915 354 aaPredicted RBP13.85□□□□□ -0.19
SNX20-205ENST00000610485 RFX1P22670 979 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 MRE11P49959 708 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 NDUFA8P51970 172 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 TSPY1Q01534 308 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 PRKCQQ04759 706 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 CYP24A1Q07973 514 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 MYO1EQ12965 1108 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 STK4Q13043 487 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 PSMD2Q13200 908 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 MLF2Q15773 248 aaPredicted RBP13.85□□□□□ -0.19
SNX20-205ENST00000610485 MGAT5BQ3V5L5 792 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 KMT5BQ4FZB7 885 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 DPH6Q7L8W6 267 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 ALYREFQ86V81 257 aaKnown RBP13.85□□□□□ -0.19
SNX20-205ENST00000610485 RDH13Q8NBN7 331 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 KIAA0895Q8NCT3 520 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 ZSCAN18Q8TBC5 510 aaPredicted RBP13.85□□□□□ -0.19
SNX20-205ENST00000610485 HPDLQ96IR7 371 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 SHDQ96IW2 340 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 PHOX2BQ99453 314 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 PKMYT1Q99640 499 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 CGRRF1Q99675 332 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 LPIN3Q9BQK8 851 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 GZF1Q9H116 711 aaPredicted RBP13.85□□□□□ -0.19
SNX20-205ENST00000610485 ZNF334Q9HCZ1 680 aaPredicted RBP13.85□□□□□ -0.19
SNX20-205ENST00000610485 EXOC1Q9NV70 894 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 TMLHEQ9NVH6 421 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 DDX43Q9NXZ2 648 aaKnown RBP13.85□□□□□ -0.19
SNX20-205ENST00000610485 PCDHB5Q9Y5E4 795 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 SCN1AP35498 2009 aa13.85□□□□□ -0.19
SNX20-205ENST00000610485 A0A1W2PQ27 194 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 A0A1W2PQ64 194 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 A0A1W2PQD8 194 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 PRPF40AO75400 957 aaKnown RBP13.84□□□□□ -0.19
SNX20-205ENST00000610485 SYKP43405 635 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 LHX1P48742 406 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 MYL7Q01449 175 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 SNW1Q13573 536 aaKnown RBP13.84□□□□□ -0.19
SNX20-205ENST00000610485 VEPH1Q14D04 833 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 NFE2Q16621 373 aaPredicted RBP13.84□□□□□ -0.19
SNX20-205ENST00000610485 SOWAHAQ2M3V2 549 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 SLC44A4Q53GD3 710 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 INTS6LQ5JSJ4 861 aaKnown RBP13.84□□□□□ -0.19
SNX20-205ENST00000610485 VITQ6UXI7 678 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 GAREM2Q75VX8 874 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 TRAPPC11Q7Z392 1133 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 OSTM1Q86WC4 334 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 ADGRF2Q8IZF7 708 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 DTWD2Q8NBA8 298 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 PJA1Q8NG27 643 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 GOLGA5Q8TBA6 731 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 TMEM174Q8WUU8 243 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 DEPDC1BQ8WUY9 529 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 DNASE1L2Q92874 299 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 MKNK1Q9BUB5 465 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 IL21Q9HBE4 155 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 FAM86C1Q9NVL1 165 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 ABI2Q9NYB9 513 aaPredicted RBP13.84□□□□□ -0.19
SNX20-205ENST00000610485 DLGAP2Q9P1A6 1054 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 SIT1Q9Y3P8 196 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 R3HCC1Q9Y3T6 440 aaKnown RBP13.84□□□□□ -0.19
SNX20-205ENST00000610485 DOCK6Q96HP0 2047 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 NCANO14594 1321 aa13.84□□□□□ -0.19
SNX20-205ENST00000610485 ZDBF2Q9HCK1 2354 aa13.83□□□□□ -0.19
SNX20-205ENST00000610485 KANSL1LA0AUZ9 987 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 DLATP10515 647 aaKnown RBP13.83□□□□□ -0.2
SNX20-205ENST00000610485 PSMC3P17980 439 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 ACAT1P24752 427 aaKnown RBP13.83□□□□□ -0.2
SNX20-205ENST00000610485 GABRR2P28476 465 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 ANP32AP39687 249 aaKnown RBP13.83□□□□□ -0.2
SNX20-205ENST00000610485 CDR1P51861 262 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 GRM2Q14416 872 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 STXBP5Q5T5C0 1151 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 SLC9A9Q8IVB4 645 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 FAM200AQ8TCP9 573 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 KBTBD7Q8WVZ9 684 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 ATOH1Q92858 354 aaPredicted RBP13.83□□□□□ -0.2
SNX20-205ENST00000610485 E2F7Q96AV8 911 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 CCDC127Q96BQ5 260 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 FNBP1Q96RU3 617 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 TRMT61BQ9BVS5 477 aaKnown RBP13.83□□□□□ -0.2
SNX20-205ENST00000610485 FOXQ1Q9C009 403 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 KCTD10Q9H3F6 313 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 SLITRK6Q9H5Y7 841 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 ABCB6Q9NP58 842 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 TRPV5Q9NQA5 729 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 DMAC2Q9NW81 257 aa13.83□□□□□ -0.2
SNX20-205ENST00000610485 COL4A3Q01955 1670 aa13.82□□□□□ -0.2
SNX20-205ENST00000610485 EXOC3O60645 756 aa13.82□□□□□ -0.2
SNX20-205ENST00000610485 CST3P01034 146 aaPredicted RBP13.82□□□□□ -0.2
SNX20-205ENST00000610485 RPN1P04843 607 aaKnown RBP13.82□□□□□ -0.2
SNX20-205ENST00000610485 DCNP07585 359 aaKnown RBP13.82□□□□□ -0.2
SNX20-205ENST00000610485 TNNI1P19237 187 aa13.82□□□□□ -0.2
SNX20-205ENST00000610485 WARSP23381 471 aaKnown RBP13.82□□□□□ -0.2
SNX20-205ENST00000610485 PCSK1P29120 753 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms