RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ACTL9Q8TC94 416 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 ZNF606Q8WXB4 792 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 SENP7Q9BQF6 1050 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 HAPLN2Q9GZV7 340 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 CCNB1P14635 433 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 BGNP21810 368 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 SLC1A1P43005 524 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 SLC8A3P57103 927 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 YWHAGP61981 247 aaKnown RBP eCLIP21.48■■□□□ 1.03
SSBP3-216ENST00000610401 NR1H3Q13133 447 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 STK32AQ8WU08 396 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 PAFAH2Q99487 392 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 MSTO1Q9BUK6 570 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 SPDYE2BA6NHP3 402 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 SMNDC1O75940 238 aaKnown RBP eCLIP21.48■■□□□ 1.035e-8■■■□□ 15.6
SSBP3-216ENST00000610401 SPDYE6P0CI01 402 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 OTUD4Q01804 1114 aaKnown RBP21.48■■□□□ 1.03
SSBP3-216ENST00000610401 CAV1Q03135 178 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 MYBPC2Q14324 1141 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 LRRC36Q1X8D7 754 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 FYB2Q5VWT5 728 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 ABRAQ8N0Z2 381 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 RSAD2Q8WXG1 361 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 CFAP36Q96G28 342 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 ATRNL1Q5VV63 1379 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 ENTPD3O75355 529 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 TJP3O95049 919 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 KRT19P08727 400 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 RAP1GAPP47736 663 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 CENPCQ03188 943 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 MOGSQ13724 837 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 TMEM154Q6P9G4 183 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 NPNTQ6UXI9 565 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 USP37Q86T82 979 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 C10orf82Q8WW14 230 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 CLPTM1LQ96KA5 538 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 MFSD14AQ96MC6 490 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 SHCBP1LQ9BZQ2 653 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 MRPL47Q9HD33 250 aaKnown RBP21.47■■□□□ 1.03
SSBP3-216ENST00000610401 XPNPEP1Q9NQW7 623 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 LGALS13Q9UHV8 139 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 FEM1BQ9UK73 627 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 ATP2A1O14983 1001 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 GYG2O15488 501 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 SMIM24O75264 130 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 GRAP2O75791 330 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 PRKCEQ02156 737 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 ZNF252P-AS1Q0IIN9 211 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 MKRN3Q13064 507 aaKnown RBP21.47■■□□□ 1.03
SSBP3-216ENST00000610401 CDO1Q16878 200 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 SPOCD1Q6ZMY3 1216 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 NLGN1Q8N2Q7 840 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 MAB21L3Q8N8X9 362 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 ZNF526Q8TF50 670 aaPredicted RBP21.47■■□□□ 1.03
SSBP3-216ENST00000610401 PDCD2LQ9BRP1 358 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 SYNCQ9H7C4 482 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 CYP39A1Q9NYL5 469 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 COQ4Q9Y3A0 265 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 PCDHA10Q9Y5I2 948 aa21.47■■□□□ 1.03
SSBP3-216ENST00000610401 KLRG2A4D1S0 409 aaPredicted RBP21.46■■□□□ 1.03
SSBP3-216ENST00000610401 RFC5P40937 340 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 KDSRQ06136 332 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 PRKG1Q13976 671 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 PDK4Q16654 411 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 TMEM132AQ24JP5 1023 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 ANO7Q6IWH7 933 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 GPAT2Q6NUI2 795 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 SLCO2A1Q92959 643 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 HERC5Q9UII4 1024 aaKnown RBP21.46■■□□□ 1.03
SSBP3-216ENST00000610401 STARD13Q9Y3M8 1113 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 UBIAD1Q9Y5Z9 338 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 FAM237BA0A1B0GVD1 139 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 E2F8A0AVK6 867 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 LINGO3P0C6S8 592 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 TFAMQ00059 246 aaKnown RBP21.46■■□□□ 1.03
SSBP3-216ENST00000610401 SGSM1Q2NKQ1 1148 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 RNF220Q5VTB9 566 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 CLNKQ7Z7G1 428 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 ALYREFQ86V81 257 aaKnown RBP21.46■■□□□ 1.03
SSBP3-216ENST00000610401 C4orf19Q8IY42 314 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 ATG4CQ96DT6 458 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 MTMR12Q9C0I1 747 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 TBC1D22BQ9NU19 505 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.46■■□□□ 1.03
SSBP3-216ENST00000610401 K7ERI5 159 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 CSDE1O75534 798 aaKnown RBP21.46■■□□□ 1.03
SSBP3-216ENST00000610401 DCTN3O75935 186 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 TOP3BO95985 862 aaKnown RBP21.46■■□□□ 1.03
SSBP3-216ENST00000610401 GCNT1Q02742 428 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 TRAF1Q13077 416 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 LARGE2Q8N3Y3 721 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 EXD1Q8NHP7 514 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 DENND1AQ8TEH3 1009 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 PARVAQ9NVD7 372 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 PSMC3IPQ9P2W1 217 aaPredicted RBP21.46■■□□□ 1.03
SSBP3-216ENST00000610401 IKBKGQ9Y6K9 419 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 SCN9AQ15858 1988 aa21.46■■□□□ 1.03
SSBP3-216ENST00000610401 CLUHO75153 1309 aa21.45■■□□□ 1.03
SSBP3-216ENST00000610401 MARK3P27448 753 aa21.45■■□□□ 1.02
SSBP3-216ENST00000610401 NCOA4Q13772 614 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms