RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 GAGE12HA6NDE8 117 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 E9PLN8 166 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 FOXN3O00409 490 aaPredicted RBP5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 BTN3A1O00481 513 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 RPS6KA4O75676 772 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 DNAJB5O75953 348 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 ABHD16AO95870 558 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 SPATA31D3P0C874 917 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 NR4A1P22736 598 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 ALDH5A1P51649 535 aaPredicted RBP5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 SLC13A2Q13183 592 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 SLC44A4Q53GD3 710 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 COLEC12Q5KU26 742 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 LMBRD2Q68DH5 695 aaPredicted RBP5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 SPATA31D4Q6ZUB0 917 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 GDF7Q7Z4P5 450 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 MRGPREQ86SM8 312 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 SESTD1Q86VW0 696 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 PMM1Q92871 262 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 BBC3Q96PG8 261 aaPredicted RBP5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 PNKPQ96T60 521 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 VKORC1Q9BQB6 163 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 CNPPD1Q9BV87 410 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 DPH1Q9BZG8 443 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 RNPEPQ9H4A4 650 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 STK32BQ9NY57 414 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 TRPM5Q9NZQ8 1165 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 AFF4Q9UHB7 1163 aaKnown RBP5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 PLEKHM1Q9Y4G2 1056 aa5.27□□□□□ -1.57
SMCHD1-213ENST00000609587 KPNA5O15131 536 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 ZNF185O15231 689 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 KIF20AO95235 890 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 GCP02774 474 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 GRPP07492 148 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 TM4SF4P48230 202 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 PRIM2P49643 509 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 POU6F2P78424 691 aaPredicted RBP5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 PIGFQ07326 219 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 ZNF844Q08AG5 666 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 RAB32Q13637 225 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 AMOTQ4VCS5 1084 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 PDCD4Q53EL6 469 aaKnown RBP5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 C3orf38Q5JPI3 329 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 FOXR2Q6PJQ5 311 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 SRLQ86TD4 932 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 FAM186BQ8IYM0 893 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 CFAP52Q8N1V2 620 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 FAM46DQ8NEK8 389 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 GJA10Q969M2 543 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 NMD3Q96D46 503 aaKnown RBP5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 CCDC138Q96M89 665 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 SMOQ99835 787 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 UNKQ9C0B0 810 aaKnown RBP5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 NRDE2Q9H7Z3 1164 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 SMURF2Q9HAU4 748 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 PNPLA8Q9NP80 782 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 PAXBP1Q9Y5B6 917 aa5.26□□□□□ -1.57
SMCHD1-213ENST00000609587 A0A1B0GTW7 788 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 TRIM43BA6NCK2 446 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 MYO1CO00159 1063 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 POLRMTO00411 1230 aaKnown RBP5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 RNASET2O00584 256 aaKnown RBP5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 VPS4BO75351 444 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 PIM1P11309 404 aaPredicted RBP5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 FGFR4P22455 802 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 ZFP36P26651 326 aaKnown RBP5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 SLC11A2P49281 568 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 CASP5P51878 434 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 HSD11B2P80365 405 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 FAM189BP81408 668 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 ZNF543Q08ER8 600 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 CTBP1Q13363 440 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 FAM160B1Q5W0V3 765 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 LRRC55Q6ZSA7 311 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 BHLHA9Q7RTU4 235 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 DPP9Q86TI2 863 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 MORC1Q86VD1 984 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 SYNE4Q8N205 404 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 MPP5Q8N3R9 675 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 DNAJC5GQ8N7S2 189 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 NSUN7Q8NE18 718 aaKnown RBP5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 ACRBPQ8NEB7 543 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 MAML1Q92585 1016 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 TRIM43Q96BQ3 446 aaPredicted RBP5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 MYEOVQ96EZ4 313 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 MED15Q96RN5 788 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 ZSWIM1Q9BR11 485 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 TEX101Q9BY14 249 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 ZNF518BQ9C0D4 1074 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 ZNF768Q9H5H4 540 aaKnown RBP5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 NLRC4Q9NPP4 1024 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 COL20A1Q9P218 1284 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 HSFX1Q9UBD0 423 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 DKK2Q9UBU2 259 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 TMX2Q9Y320 296 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 HS3ST4Q9Y661 456 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 COMMD10Q9Y6G5 202 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 AATKQ6ZMQ8 1374 aa5.25□□□□□ -1.57
SMCHD1-213ENST00000609587 CCDC78A2IDD5 438 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 POM121BA6NF01 834 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms