RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 RNF135Q8IUD6 432 aa15.3■□□□□ 0.04
HDDC2-209ENST00000609477 MLKLQ8NB16 471 aa15.3■□□□□ 0.04
HDDC2-209ENST00000609477 NXPE3Q969Y0 559 aa15.3■□□□□ 0.04
HDDC2-209ENST00000609477 ZNF512Q96ME7 567 aaPredicted RBP15.3■□□□□ 0.04
HDDC2-209ENST00000609477 IMPG2Q9BZV3 1241 aa15.3■□□□□ 0.04
HDDC2-209ENST00000609477 ABCB6Q9NP58 842 aa15.3■□□□□ 0.04
HDDC2-209ENST00000609477 EPS15L1Q9UBC2 864 aa15.3■□□□□ 0.04
HDDC2-209ENST00000609477 CDH22Q9UJ99 828 aa15.3■□□□□ 0.04
HDDC2-209ENST00000609477 CDH9Q9ULB4 789 aa15.3■□□□□ 0.04
HDDC2-209ENST00000609477 C2CD4DB7Z1M9 353 aa15.29■□□□□ 0.04
HDDC2-209ENST00000609477 BIN1O00499 593 aa15.29■□□□□ 0.04
HDDC2-209ENST00000609477 ASS1P00966 412 aaKnown RBP15.29■□□□□ 0.04
HDDC2-209ENST00000609477 OR4Q2P0C623 313 aa15.29■□□□□ 0.04
HDDC2-209ENST00000609477 CD44P16070 742 aaKnown RBP15.29■□□□□ 0.04
HDDC2-209ENST00000609477 FSHRP23945 695 aa15.29■□□□□ 0.04
HDDC2-209ENST00000609477 GNL1P36915 607 aaPredicted RBP15.29■□□□□ 0.04
HDDC2-209ENST00000609477 PMS1P54277 932 aaKnown RBP15.29■□□□□ 0.04
HDDC2-209ENST00000609477 EPHB3P54753 998 aa15.29■□□□□ 0.04
HDDC2-209ENST00000609477 DUSP4Q13115 394 aa15.29■□□□□ 0.04
HDDC2-209ENST00000609477 PAK1Q13153 545 aa15.29■□□□□ 0.04
HDDC2-209ENST00000609477 PABPC1LQ4VXU2 614 aaKnown RBP15.29■□□□□ 0.04
HDDC2-209ENST00000609477 CT47A1Q5JQC4 288 aaPredicted RBP15.29■□□□□ 0.04
HDDC2-209ENST00000609477 INTS6LQ5JSJ4 861 aaKnown RBP15.29■□□□□ 0.04
HDDC2-209ENST00000609477 SCARA3Q6AZY7 606 aa15.29■□□□□ 0.04
HDDC2-209ENST00000609477 TTI2Q6NXR4 508 aa15.29■□□□□ 0.04
HDDC2-209ENST00000609477 GRASPQ7Z6J2 395 aaPredicted RBP15.29■□□□□ 0.04
HDDC2-209ENST00000609477 CCDC150Q8NCX0 1101 aa15.29■□□□□ 0.04
HDDC2-209ENST00000609477 KBTBD7Q8WVZ9 684 aa15.29■□□□□ 0.04
HDDC2-209ENST00000609477 NELFBQ8WX92 580 aa15.29■□□□□ 0.04
HDDC2-209ENST00000609477 FUBP3Q96I24 572 aaKnown RBP eCLIP15.29■□□□□ 0.04
HDDC2-209ENST00000609477 FAM84AQ96KN4 292 aa15.29■□□□□ 0.04
HDDC2-209ENST00000609477 NUP62CLQ9H1M0 184 aa15.29■□□□□ 0.04
HDDC2-209ENST00000609477 FAM124BQ9H5Z6 455 aaPredicted RBP15.29■□□□□ 0.04
HDDC2-209ENST00000609477 DNMT3BQ9UBC3 853 aaKnown RBP15.29■□□□□ 0.04
HDDC2-209ENST00000609477 ARMCX3Q9UH62 379 aaPredicted RBP15.29■□□□□ 0.04
HDDC2-209ENST00000609477 POLIQ9UNA4 740 aa15.29■□□□□ 0.04
HDDC2-209ENST00000609477 PCDHB5Q9Y5E4 795 aa15.29■□□□□ 0.04
HDDC2-209ENST00000609477 TRIM49BA6NDI0 452 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 DCXO43602 365 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 VNN1O95497 513 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 VNN2O95498 520 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 FGF19O95750 216 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 EPHA5P54756 1037 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 TWF1Q12792 350 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 CFAP221Q4G0U5 840 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 CYP4A22Q5TCH4 519 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 FAM171BQ6P995 826 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 C4orf50Q6ZRC1 276 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 ITIH5Q86UX2 942 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 LRRTM3Q86VH5 581 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 ATAD1Q8NBU5 361 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 CEP295NLQ96MC4 621 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 PGLYRP2Q96PD5 576 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 TMEM209Q96SK2 561 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 PKMYT1Q99640 499 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 SNX25Q9H3E2 840 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 IGSF9Q9P2J2 1179 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 RWDD2AQ9UIY3 292 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 YIPF1Q9Y548 306 aa15.28■□□□□ 0.04
HDDC2-209ENST00000609477 PMM2O15305 246 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 MBD3O95983 291 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 HLA-DRAP01903 254 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 RHOP08100 348 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 TRIM49P0CI25 452 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 TRIM49CP0CI26 452 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 LAMP2P13473 410 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 TRIM21P19474 475 aaKnown RBP15.27■□□□□ 0.04
HDDC2-209ENST00000609477 GBP2P32456 591 aaPredicted RBP15.27■□□□□ 0.04
HDDC2-209ENST00000609477 PIK3CAP42336 1068 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 GCLMP48507 274 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 MARSP56192 900 aaKnown RBP15.27■□□□□ 0.04
HDDC2-209ENST00000609477 PPP3CAQ08209 521 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 VEPH1Q14D04 833 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 KLHL10Q6JEL2 608 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 TTC39CQ8N584 583 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 FBXL13Q8NEE6 735 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 PSMG2Q969U7 264 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 DUSP9Q99956 384 aaKnown RBP15.27■□□□□ 0.04
HDDC2-209ENST00000609477 C1QTNF1Q9BXJ1 281 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 DNAI2Q9GZS0 605 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 GDE1Q9NZC3 331 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 NXF1Q9UBU9 619 aaKnown RBP15.27■□□□□ 0.04
HDDC2-209ENST00000609477 DACH1Q9UI36 760 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 CDH7Q9ULB5 785 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 COQ4Q9Y3A0 265 aa15.27■□□□□ 0.04
HDDC2-209ENST00000609477 HAPLN1P10915 354 aaPredicted RBP15.26■□□□□ 0.03
HDDC2-209ENST00000609477 MAGEA11P43364 429 aa15.26■□□□□ 0.03
HDDC2-209ENST00000609477 MXI1P50539 228 aa15.26■□□□□ 0.03
HDDC2-209ENST00000609477 RPL10AP62906 217 aaKnown RBP15.26■□□□□ 0.03
HDDC2-209ENST00000609477 PTPN21Q16825 1174 aa15.26■□□□□ 0.03
HDDC2-209ENST00000609477 MGAT5BQ3V5L5 792 aa15.26■□□□□ 0.03
HDDC2-209ENST00000609477 PDZD4Q76G19 769 aaPredicted RBP15.26■□□□□ 0.03
HDDC2-209ENST00000609477 UNC93AQ86WB7 457 aa15.26■□□□□ 0.03
HDDC2-209ENST00000609477 OSTM1Q86WC4 334 aa15.26■□□□□ 0.03
HDDC2-209ENST00000609477 UBALD2Q8IYN6 164 aa15.26■□□□□ 0.03
HDDC2-209ENST00000609477 OR6B3Q8NGW1 331 aa15.26■□□□□ 0.03
HDDC2-209ENST00000609477 FEZF2Q8TBJ5 459 aa15.26■□□□□ 0.03
HDDC2-209ENST00000609477 MYCBPAPQ8TBZ2 947 aa15.26■□□□□ 0.03
HDDC2-209ENST00000609477 EEF2KMTQ96G04 330 aa15.26■□□□□ 0.03
HDDC2-209ENST00000609477 TNIP3Q96KP6 325 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms