RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 DPYDQ12882 1025 aa16.21■□□□□ 0.19
LMBR1-220ENST00000609081 MAPRE1Q15691 268 aaKnown RBP16.21■□□□□ 0.19
LMBR1-220ENST00000609081 MGAT5BQ3V5L5 792 aa16.21■□□□□ 0.19
LMBR1-220ENST00000609081 PHLDB3Q6NSJ2 640 aa16.21■□□□□ 0.19
LMBR1-220ENST00000609081 LIMS2Q7Z4I7 341 aa16.21■□□□□ 0.19
LMBR1-220ENST00000609081 ADGRF2Q8IZF7 708 aa16.21■□□□□ 0.19
LMBR1-220ENST00000609081 GPR152Q8TDT2 470 aa16.21■□□□□ 0.19
LMBR1-220ENST00000609081 CCDC127Q96BQ5 260 aa16.21■□□□□ 0.19
LMBR1-220ENST00000609081 MCRS1Q96EZ8 462 aa16.21■□□□□ 0.19
LMBR1-220ENST00000609081 FUBP3Q96I24 572 aaKnown RBP eCLIP16.21■□□□□ 0.19
LMBR1-220ENST00000609081 CHAMP1Q96JM3 812 aa16.21■□□□□ 0.19
LMBR1-220ENST00000609081 TMEM209Q96SK2 561 aa16.21■□□□□ 0.19
LMBR1-220ENST00000609081 GTPBP4Q9BZE4 634 aaKnown RBP16.21■□□□□ 0.19
LMBR1-220ENST00000609081 CRISPLD1Q9H336 500 aa16.21■□□□□ 0.19
LMBR1-220ENST00000609081 KCTD10Q9H3F6 313 aa16.21■□□□□ 0.19
LMBR1-220ENST00000609081 TRPV4Q9HBA0 871 aa16.21■□□□□ 0.19
LMBR1-220ENST00000609081 ZFP14Q9HCL3 533 aa16.21■□□□□ 0.19
LMBR1-220ENST00000609081 TRAF3IP3Q9Y228 551 aa16.21■□□□□ 0.19
LMBR1-220ENST00000609081 SLC27A5Q9Y2P5 690 aa16.21■□□□□ 0.19
LMBR1-220ENST00000609081 PIEZO1Q92508 2521 aa16.21■□□□□ 0.19
LMBR1-220ENST00000609081 PTPRJQ12913 1337 aa16.2■□□□□ 0.18
LMBR1-220ENST00000609081 HAPLN1P10915 354 aaPredicted RBP16.2■□□□□ 0.18
LMBR1-220ENST00000609081 AOC1P19801 751 aa16.2■□□□□ 0.18
LMBR1-220ENST00000609081 CCR2P41597 374 aa16.2■□□□□ 0.18
LMBR1-220ENST00000609081 VCPP55072 806 aaKnown RBP16.2■□□□□ 0.18
LMBR1-220ENST00000609081 CLDN10P78369 228 aa16.2■□□□□ 0.18
LMBR1-220ENST00000609081 TAF12Q16514 161 aa16.2■□□□□ 0.18
LMBR1-220ENST00000609081 NFIL3Q16649 462 aa16.2■□□□□ 0.18
LMBR1-220ENST00000609081 SOWAHAQ2M3V2 549 aa16.2■□□□□ 0.18
LMBR1-220ENST00000609081 INTS6LQ5JSJ4 861 aaKnown RBP16.2■□□□□ 0.18
LMBR1-220ENST00000609081 LMBRD2Q68DH5 695 aaPredicted RBP16.2■□□□□ 0.18
LMBR1-220ENST00000609081 DNAJB7Q7Z6W7 309 aaPredicted RBP16.2■□□□□ 0.18
LMBR1-220ENST00000609081 TMC8Q8IU68 726 aa16.2■□□□□ 0.18
LMBR1-220ENST00000609081 GUF1Q8N442 669 aaKnown RBP16.2■□□□□ 0.18
LMBR1-220ENST00000609081 SMARCD2Q92925 531 aa16.2■□□□□ 0.18
LMBR1-220ENST00000609081 SYAP1Q96A49 352 aaPredicted RBP16.2■□□□□ 0.18
LMBR1-220ENST00000609081 ASB16Q96NS5 453 aa16.2■□□□□ 0.18
LMBR1-220ENST00000609081 SEPT5Q99719 369 aaPredicted RBP16.2■□□□□ 0.18
LMBR1-220ENST00000609081 LRRC3Q9BY71 257 aa16.2■□□□□ 0.18
LMBR1-220ENST00000609081 DNAJC25Q9H1X3 360 aa16.2■□□□□ 0.18
LMBR1-220ENST00000609081 GOLPH3LQ9H4A5 285 aa16.2■□□□□ 0.18
LMBR1-220ENST00000609081 ARHGEF3Q9NR81 526 aa16.2■□□□□ 0.18
LMBR1-220ENST00000609081 HOOK1Q9UJC3 728 aaKnown RBP16.2■□□□□ 0.18
LMBR1-220ENST00000609081 FRMD4BQ9Y2L6 1034 aa16.2■□□□□ 0.18
LMBR1-220ENST00000609081 SOBPA7XYQ1 873 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 MAPK13O15264 365 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 RFX1P22670 979 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 WARSP23381 471 aaKnown RBP16.19■□□□□ 0.18
LMBR1-220ENST00000609081 RPL13P26373 211 aaKnown RBP16.19■□□□□ 0.18
LMBR1-220ENST00000609081 CDC25CP30307 473 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 RPL10AP62906 217 aaKnown RBP16.19■□□□□ 0.18
LMBR1-220ENST00000609081 GPC5P78333 572 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 PRKCQQ04759 706 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 ENPEPQ07075 957 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 TRPC3Q13507 836 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 CFAP221Q4G0U5 840 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 ARHGAP15Q53QZ3 475 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 C4orf50Q6ZRC1 276 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 LRRTM3Q86VH5 581 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 HS6ST3Q8IZP7 471 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 FLCNQ8NFG4 579 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 FAM200AQ8TCP9 573 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 TMC2Q8TDI7 906 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 PARD3BQ8TEW8 1205 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 DEPDC1BQ8WUY9 529 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 DNASE1L2Q92874 299 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 TCEAL4Q96EI5 215 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 CEP295NLQ96MC4 621 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 GCNAQ96QF7 691 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 KXD1Q9BQD3 176 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 GDPD2Q9HCC8 539 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 RMND1Q9NWS8 449 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 ABI2Q9NYB9 513 aaPredicted RBP16.19■□□□□ 0.18
LMBR1-220ENST00000609081 CDH9Q9ULB4 789 aa16.19■□□□□ 0.18
LMBR1-220ENST00000609081 IKBKBO14920 756 aa16.18■□□□□ 0.18
LMBR1-220ENST00000609081 GALR2O43603 387 aaPredicted RBP16.18■□□□□ 0.18
LMBR1-220ENST00000609081 PHACTR2O75167 634 aa16.18■□□□□ 0.18
LMBR1-220ENST00000609081 TACC1O75410 805 aa16.18■□□□□ 0.18
LMBR1-220ENST00000609081 MOSPD3O75425 235 aa16.18■□□□□ 0.18
LMBR1-220ENST00000609081 NR3C1P04150 777 aa16.18■□□□□ 0.18
LMBR1-220ENST00000609081 NPR3P17342 541 aa16.18■□□□□ 0.18
LMBR1-220ENST00000609081 WEE1P30291 646 aa16.18■□□□□ 0.18
LMBR1-220ENST00000609081 TNNC1P63316 161 aa16.18■□□□□ 0.18
LMBR1-220ENST00000609081 FAM78AQ5JUQ0 283 aa16.18■□□□□ 0.18
LMBR1-220ENST00000609081 CWF19L1Q69YN2 538 aaKnown RBP16.18■□□□□ 0.18
LMBR1-220ENST00000609081 FMR1NBQ8N0W7 255 aaPredicted RBP16.18■□□□□ 0.18
LMBR1-220ENST00000609081 TTC9BQ8N6N2 239 aa16.18■□□□□ 0.18
LMBR1-220ENST00000609081 TMEM105Q8N8V8 129 aa16.18■□□□□ 0.18
LMBR1-220ENST00000609081 SHKBP1Q8TBC3 707 aa16.18■□□□□ 0.18
LMBR1-220ENST00000609081 TIGD1Q96MW7 591 aa16.18■□□□□ 0.18
LMBR1-220ENST00000609081 RPP25Q9BUL9 199 aaKnown RBP16.18■□□□□ 0.18
LMBR1-220ENST00000609081 SLITRK6Q9H5Y7 841 aa16.18■□□□□ 0.18
LMBR1-220ENST00000609081 VRTNQ9H8Y1 702 aa16.18■□□□□ 0.18
LMBR1-220ENST00000609081 TRPV5Q9NQA5 729 aa16.18■□□□□ 0.18
LMBR1-220ENST00000609081 UXTQ9UBK9 157 aaPredicted RBP16.18■□□□□ 0.18
LMBR1-220ENST00000609081 CIZ1Q9ULV3 898 aaPredicted RBP16.18■□□□□ 0.18
LMBR1-220ENST00000609081 CA14Q9ULX7 337 aa16.18■□□□□ 0.18
LMBR1-220ENST00000609081 WDFY4Q6ZS81 3184 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 NUP210Q8TEM1 1887 aaPredicted RBP16.17■□□□□ 0.18
LMBR1-220ENST00000609081 A0A1W2PRU2 124 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms