RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 THAP12O43422 761 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 MED7O43513 233 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 UPP2O95045 317 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 UNGP13051 313 aaPredicted RBP17.56■□□□□ 0.4
PMF1-206ENST00000606952 GNL1P36915 607 aaPredicted RBP17.56■□□□□ 0.4
PMF1-206ENST00000606952 VAV2P52735 878 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 BCAR1P56945 870 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 GFPT1Q06210 699 aaPredicted RBP17.56■□□□□ 0.4
PMF1-206ENST00000606952 SPA17Q15506 151 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 CNGA2Q16280 664 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 PALB2Q86YC2 1186 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 REXO1L1PQ8IX06 675 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 TXLNBQ8N3L3 684 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 OR6B3Q8NGW1 331 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 RABGGTAQ92696 567 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 TNIP3Q96KP6 325 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 LBHD1Q9BQE6 289 aaPredicted RBP17.56■□□□□ 0.4
PMF1-206ENST00000606952 DESI2Q9BSY9 194 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.56■□□□□ 0.4
PMF1-206ENST00000606952 SNX25Q9H3E2 840 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 LUC7LQ9NQ29 371 aaKnown RBP17.56■□□□□ 0.4
PMF1-206ENST00000606952 CXXC1Q9P0U4 656 aaPredicted RBP17.56■□□□□ 0.4
PMF1-206ENST00000606952 HCSTQ9UBK5 93 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.56■□□□□ 0.43e-8■■■■■ 71.2
PMF1-206ENST00000606952 NR2E3Q9Y5X4 410 aa17.56■□□□□ 0.4
PMF1-206ENST00000606952 SF3B1O75533 1304 aaKnown RBP eCLIP17.55■□□□□ 0.45e-10■■■■■ 120.6
PMF1-206ENST00000606952 NLRC5Q86WI3 1866 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 GOLGA6L9A6NEM1 432 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 A8MXQ7 604 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 ESPNB1AK53 854 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 OAZ2O95190 189 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 LINC00271P0C7V0 271 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 LAG3P18627 525 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 FGFR3P22607 806 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 BRD2P25440 801 aaKnown RBP17.55■□□□□ 0.4
PMF1-206ENST00000606952 NOMO3P69849 1222 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 CENPCQ03188 943 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 CLEC16AQ2KHT3 1053 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 PAN2Q504Q3 1202 aaKnown RBP17.55■□□□□ 0.4
PMF1-206ENST00000606952 ZNF394Q53GI3 561 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 SGO2Q562F6 1265 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 FUT10Q6P4F1 479 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 LCLAT1Q6UWP7 414 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 RTP3Q9BQQ7 232 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 ZNF518BQ9C0D4 1074 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 LHX5Q9H2C1 402 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 CDH9Q9ULB4 789 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 PRG3Q9Y2Y8 225 aaPredicted RBP17.55■□□□□ 0.4
PMF1-206ENST00000606952 PCDHA13Q9Y5I0 950 aa17.55■□□□□ 0.4
PMF1-206ENST00000606952 ZBBXA8MT70 800 aa17.54■□□□□ 0.4
PMF1-206ENST00000606952 BTNL10A8MVZ5 291 aa17.54■□□□□ 0.4
PMF1-206ENST00000606952 ZNF500O60304 480 aaPredicted RBP17.54■□□□□ 0.4
PMF1-206ENST00000606952 RTN2O75298 545 aa17.54■□□□□ 0.4
PMF1-206ENST00000606952 TADA2AO75478 443 aa17.54■□□□□ 0.4
PMF1-206ENST00000606952 MSNP26038 577 aaKnown RBP17.54■□□□□ 0.4
PMF1-206ENST00000606952 PCSK1P29120 753 aa17.54■□□□□ 0.4
PMF1-206ENST00000606952 CYP27A1Q02318 531 aa17.54■□□□□ 0.4
PMF1-206ENST00000606952 MRPL58Q14197 206 aaKnown RBP17.54■□□□□ 0.4
PMF1-206ENST00000606952 PKDCCQ504Y2 493 aa17.54■□□□□ 0.4
PMF1-206ENST00000606952 CCDC122Q5T0U0 273 aa17.54■□□□□ 0.4
PMF1-206ENST00000606952 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.54■□□□□ 0.4
PMF1-206ENST00000606952 METTL23Q86XA0 190 aa17.54■□□□□ 0.4
PMF1-206ENST00000606952 HERC6Q8IVU3 1022 aa17.54■□□□□ 0.4
PMF1-206ENST00000606952 HASPINQ8TF76 798 aa17.54■□□□□ 0.4
PMF1-206ENST00000606952 PPP1R13BQ96KQ4 1090 aa17.54■□□□□ 0.4
PMF1-206ENST00000606952 PKMYT1Q99640 499 aa17.54■□□□□ 0.4
PMF1-206ENST00000606952 ACBD6Q9BR61 282 aa17.54■□□□□ 0.4
PMF1-206ENST00000606952 DDX43Q9NXZ2 648 aaKnown RBP17.54■□□□□ 0.4
PMF1-206ENST00000606952 MRPL42Q9Y6G3 142 aaKnown RBP17.54■□□□□ 0.4
PMF1-206ENST00000606952 I3L4J1 428 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 CALCAP01258 141 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 CD19P15391 556 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 LMO2P25791 158 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 ARHGAP25P42331 645 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 MAGEA1P43355 309 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 BTG3Q14201 252 aaPredicted RBP17.53■□□□□ 0.4
PMF1-206ENST00000606952 TCEAL1Q15170 157 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 KIAA0319Q5VV43 1072 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 TAF3Q5VWG9 929 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 ACAD10Q6JQN1 1059 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 KCNT2Q6UVM3 1135 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 TMCO2Q7Z6W1 182 aaPredicted RBP17.53■□□□□ 0.4
PMF1-206ENST00000606952 ACOT1Q86TX2 421 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 TMEM173Q86WV6 379 aaPredicted RBP17.53■□□□□ 0.4
PMF1-206ENST00000606952 PHF13Q86YI8 300 aaPredicted RBP17.53■□□□□ 0.4
PMF1-206ENST00000606952 SLC39A11Q8N1S5 342 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 COLGALT1Q8NBJ5 622 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 B3GALNT2Q8NCR0 500 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 BCL7CQ8WUZ0 217 aaPredicted RBP17.53■□□□□ 0.4
PMF1-206ENST00000606952 CLP1Q92989 425 aaKnown RBP17.53■□□□□ 0.4
PMF1-206ENST00000606952 IGSF21Q96ID5 467 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 ZNF558Q96NG5 402 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 YME1L1Q96TA2 773 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 DPEP3Q9H4B8 488 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 INSL6Q9Y581 213 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 SLC4A7Q9Y6M7 1214 aa17.53■□□□□ 0.4
PMF1-206ENST00000606952 PATJQ8NI35 1801 aa17.52■□□□□ 0.4
PMF1-206ENST00000606952 ANKRD62A6NC57 917 aa17.52■□□□□ 0.4
PMF1-206ENST00000606952 USP27XA6NNY8 438 aa17.52■□□□□ 0.4
PMF1-206ENST00000606952 CFHP08603 1231 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms