RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 FAM136AQ96C01 138 aa6.52□□□□□ -1.37
TUBE1-205ENST00000603651 PBKQ96KB5 322 aa6.52□□□□□ -1.37
TUBE1-205ENST00000603651 SIK2Q9H0K1 926 aa6.52□□□□□ -1.37
TUBE1-205ENST00000603651 MRPL46Q9H2W6 279 aaKnown RBP6.52□□□□□ -1.37
TUBE1-205ENST00000603651 AASDHPPTQ9NRN7 309 aa6.52□□□□□ -1.37
TUBE1-205ENST00000603651 PNPOQ9NVS9 261 aa6.52□□□□□ -1.37
TUBE1-205ENST00000603651 SPATA31A3Q5VYP0 1347 aa6.51□□□□□ -1.37
TUBE1-205ENST00000603651 PPM1DO15297 605 aa6.51□□□□□ -1.37
TUBE1-205ENST00000603651 FTH1P19P0C7X4 201 aa6.51□□□□□ -1.37
TUBE1-205ENST00000603651 KCNJ5P48544 419 aa6.51□□□□□ -1.37
TUBE1-205ENST00000603651 CCT8P50990 548 aa6.51□□□□□ -1.37
TUBE1-205ENST00000603651 TMEM108Q6UXF1 575 aa6.51□□□□□ -1.37
TUBE1-205ENST00000603651 ZCRB1Q8TBF4 217 aaKnown RBP6.51□□□□□ -1.37
TUBE1-205ENST00000603651 GTPBP4Q9BZE4 634 aaKnown RBP6.51□□□□□ -1.37
TUBE1-205ENST00000603651 KMT5AQ9NQR1 393 aa6.51□□□□□ -1.37
TUBE1-205ENST00000603651 RNF7Q9UBF6 113 aa6.51□□□□□ -1.37
TUBE1-205ENST00000603651 IP6K2Q9UHH9 426 aa6.51□□□□□ -1.37
TUBE1-205ENST00000603651 WDR27A2RRH5 827 aa6.5□□□□□ -1.37
TUBE1-205ENST00000603651 SLC16A6O15403 523 aa6.5□□□□□ -1.37
TUBE1-205ENST00000603651 HNRNPCP07910 306 aaKnown RBP eCLIP6.5□□□□□ -1.37
TUBE1-205ENST00000603651 POU2F2P09086 479 aa6.5□□□□□ -1.37
TUBE1-205ENST00000603651 TYRP14679 529 aa6.5□□□□□ -1.37
TUBE1-205ENST00000603651 NDUFB7P17568 137 aa6.5□□□□□ -1.37
TUBE1-205ENST00000603651 BOP1Q14137 746 aaKnown RBP6.5□□□□□ -1.37
TUBE1-205ENST00000603651 PGS1Q32NB8 556 aa6.5□□□□□ -1.37
TUBE1-205ENST00000603651 LAYNQ6UX15 382 aa6.5□□□□□ -1.37
TUBE1-205ENST00000603651 SRRM1Q8IYB3 904 aaKnown RBP6.5□□□□□ -1.37
TUBE1-205ENST00000603651 KLHDC4Q8TBB5 520 aa6.5□□□□□ -1.37
TUBE1-205ENST00000603651 SLC46A1Q96NT5 459 aa6.5□□□□□ -1.37
TUBE1-205ENST00000603651 OSBPL9Q96SU4 736 aa6.5□□□□□ -1.37
TUBE1-205ENST00000603651 ARMT1Q9H993 441 aa6.5□□□□□ -1.37
TUBE1-205ENST00000603651 EHD3Q9NZN3 535 aa6.5□□□□□ -1.37
TUBE1-205ENST00000603651 PCDHA6Q9UN73 950 aa6.5□□□□□ -1.37
TUBE1-205ENST00000603651 HDCP19113 662 aa6.49□□□□□ -1.37
TUBE1-205ENST00000603651 WT1P19544 449 aaPredicted RBP6.49□□□□□ -1.37
TUBE1-205ENST00000603651 TOB1P50616 345 aaPredicted RBP6.49□□□□□ -1.37
TUBE1-205ENST00000603651 FOXF2Q12947 444 aa6.49□□□□□ -1.37
TUBE1-205ENST00000603651 FAM160B1Q5W0V3 765 aa6.49□□□□□ -1.37
TUBE1-205ENST00000603651 GRAMD1CQ8IYS0 662 aa6.49□□□□□ -1.37
TUBE1-205ENST00000603651 PRR18Q8N4B5 295 aa6.49□□□□□ -1.37
TUBE1-205ENST00000603651 BRIX1Q8TDN6 353 aaKnown RBP6.49□□□□□ -1.37
TUBE1-205ENST00000603651 RFKQ969G6 155 aa6.49□□□□□ -1.37
TUBE1-205ENST00000603651 ALG8Q9BVK2 526 aa6.49□□□□□ -1.37
TUBE1-205ENST00000603651 SERHLQ9NQF3 203 aa6.49□□□□□ -1.37
TUBE1-205ENST00000603651 SH3BP4Q9P0V3 963 aa6.49□□□□□ -1.37
TUBE1-205ENST00000603651 CPA4Q9UI42 421 aa6.49□□□□□ -1.37
TUBE1-205ENST00000603651 ZDHHC8Q9ULC8 765 aa6.49□□□□□ -1.37
TUBE1-205ENST00000603651 DNAJC9-AS1A6NH13 148 aa6.48□□□□□ -1.37
TUBE1-205ENST00000603651 GCOM1H8Y6P7 765 aaPredicted RBP6.48□□□□□ -1.37
TUBE1-205ENST00000603651 SOAT2O75908 522 aa6.48□□□□□ -1.37
TUBE1-205ENST00000603651 CT47B1P0C2W7 299 aaPredicted RBP6.48□□□□□ -1.37
TUBE1-205ENST00000603651 IBSPP21815 317 aaPredicted RBP6.48□□□□□ -1.37
TUBE1-205ENST00000603651 ITPKBP27987 946 aa6.48□□□□□ -1.37
TUBE1-205ENST00000603651 CLCN2P51788 898 aa6.48□□□□□ -1.37
TUBE1-205ENST00000603651 ZNF134P52741 427 aa6.48□□□□□ -1.37
TUBE1-205ENST00000603651 BMPR2Q13873 1038 aa6.48□□□□□ -1.37
TUBE1-205ENST00000603651 PLS1Q14651 629 aa6.48□□□□□ -1.37
TUBE1-205ENST00000603651 SRSF7Q16629 238 aaKnown RBP eCLIP6.48□□□□□ -1.37
TUBE1-205ENST00000603651 PTPROQ16827 1216 aa6.48□□□□□ -1.37
TUBE1-205ENST00000603651 PLAC9Q5JTB6 97 aa6.48□□□□□ -1.37
TUBE1-205ENST00000603651 FCRLBQ6BAA4 426 aa6.48□□□□□ -1.37
TUBE1-205ENST00000603651 CELF5Q8N6W0 485 aaKnown RBP6.48□□□□□ -1.37
TUBE1-205ENST00000603651 DPF1Q92782 380 aa6.48□□□□□ -1.37
TUBE1-205ENST00000603651 CHMP4CQ96CF2 233 aa6.48□□□□□ -1.37
TUBE1-205ENST00000603651 MVB12AQ96EY5 273 aa6.48□□□□□ -1.37
TUBE1-205ENST00000603651 ARHGEF3Q9NR81 526 aa6.48□□□□□ -1.37
TUBE1-205ENST00000603651 SERTAD3Q9UJW9 196 aa6.48□□□□□ -1.37
TUBE1-205ENST00000603651 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.48□□□□□ -1.37
TUBE1-205ENST00000603651 UNC5CO95185 931 aa6.47□□□□□ -1.37
TUBE1-205ENST00000603651 PF4V1P10720 104 aa6.47□□□□□ -1.37
TUBE1-205ENST00000603651 DRD4P21917 467 aa6.47□□□□□ -1.37
TUBE1-205ENST00000603651 SOX10P56693 466 aa6.47□□□□□ -1.37
TUBE1-205ENST00000603651 TMEM240Q5SV17 173 aa6.47□□□□□ -1.37
TUBE1-205ENST00000603651 ZNF551Q7Z340 670 aaPredicted RBP6.47□□□□□ -1.37
TUBE1-205ENST00000603651 PPP1R32Q7Z5V6 425 aa6.47□□□□□ -1.37
TUBE1-205ENST00000603651 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.47□□□□□ -1.37
TUBE1-205ENST00000603651 HASPINQ8TF76 798 aa6.47□□□□□ -1.37
TUBE1-205ENST00000603651 ATRIPQ8WXE1 791 aa6.47□□□□□ -1.37
TUBE1-205ENST00000603651 DDX17Q92841 729 aaKnown RBP6.47□□□□□ -1.37
TUBE1-205ENST00000603651 HOOK2Q96ED9 719 aa6.47□□□□□ -1.37
TUBE1-205ENST00000603651 SLC35A4Q96G79 324 aa6.47□□□□□ -1.37
TUBE1-205ENST00000603651 HESX1Q9UBX0 185 aa6.47□□□□□ -1.37
TUBE1-205ENST00000603651 STAP2Q9UGK3 403 aa6.47□□□□□ -1.37
TUBE1-205ENST00000603651 SMIM22K7EJ46 135 aa6.46□□□□□ -1.38
TUBE1-205ENST00000603651 PIM1P11309 404 aaPredicted RBP6.46□□□□□ -1.38
TUBE1-205ENST00000603651 ALDH9A1P49189 494 aa6.46□□□□□ -1.38
TUBE1-205ENST00000603651 SOX8P57073 446 aa6.46□□□□□ -1.38
TUBE1-205ENST00000603651 LILRA4P59901 499 aa6.46□□□□□ -1.38
TUBE1-205ENST00000603651 SP2Q02086 613 aa6.46□□□□□ -1.38
TUBE1-205ENST00000603651 HNRNPA0Q13151 305 aaKnown RBP6.46□□□□□ -1.38
TUBE1-205ENST00000603651 KHDC1LQ5JSQ8 128 aa6.46□□□□□ -1.38
TUBE1-205ENST00000603651 ARHGAP40Q5TG30 622 aa6.46□□□□□ -1.38
TUBE1-205ENST00000603651 PTF1AQ7RTS3 328 aa6.46□□□□□ -1.38
TUBE1-205ENST00000603651 MAP3K14Q99558 947 aa6.46□□□□□ -1.38
TUBE1-205ENST00000603651 SARS2Q9NP81 518 aaKnown RBP6.46□□□□□ -1.38
TUBE1-205ENST00000603651 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.46□□□□□ -1.38
TUBE1-205ENST00000603651 WDR91A4D1P6 747 aa6.45□□□□□ -1.38
TUBE1-205ENST00000603651 PRKCGP05129 697 aa6.45□□□□□ -1.38
TUBE1-205ENST00000603651 FAM163BP0C2L3 166 aa6.45□□□□□ -1.38
TUBE1-205ENST00000603651 JUPP14923 745 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms