RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 THG1LQ9NWX6 298 aaKnown RBP17.41■□□□□ 0.38
SSBP4-211ENST00000601614 ANAPC1Q9H1A4 1944 aa17.41■□□□□ 0.38
SSBP4-211ENST00000601614 ADAMTS9Q9P2N4 1935 aa17.41■□□□□ 0.38
SSBP4-211ENST00000601614 DMXL2Q8TDJ6 3036 aa17.4■□□□□ 0.38
SSBP4-211ENST00000601614 ANTXRLA6NF34 631 aa17.4■□□□□ 0.38
SSBP4-211ENST00000601614 RHOBTB1O94844 696 aa17.4■□□□□ 0.38
SSBP4-211ENST00000601614 CEACAM1P13688 526 aa17.4■□□□□ 0.38
SSBP4-211ENST00000601614 TYMPP19971 482 aa17.4■□□□□ 0.38
SSBP4-211ENST00000601614 CSRP1P21291 193 aaKnown RBP17.4■□□□□ 0.38
SSBP4-211ENST00000601614 GUCY1B3Q02153 619 aa17.4■□□□□ 0.38
SSBP4-211ENST00000601614 DMC1Q14565 340 aa17.4■□□□□ 0.38
SSBP4-211ENST00000601614 PTPAQ15257 358 aa17.4■□□□□ 0.38
SSBP4-211ENST00000601614 KIAA1211LQ6NV74 962 aa17.4■□□□□ 0.38
SSBP4-211ENST00000601614 SYT13Q7L8C5 426 aa17.4■□□□□ 0.38
SSBP4-211ENST00000601614 GIPC2Q8TF65 315 aa17.4■□□□□ 0.38
SSBP4-211ENST00000601614 ZCCHC14Q8WYQ9 949 aaKnown RBP17.4■□□□□ 0.38
SSBP4-211ENST00000601614 GTF3C6Q969F1 213 aa17.4■□□□□ 0.38
SSBP4-211ENST00000601614 EBF1Q9UH73 591 aa17.4■□□□□ 0.38
SSBP4-211ENST00000601614 LHX6Q9UPM6 363 aa17.4■□□□□ 0.38
SSBP4-211ENST00000601614 DSPP15924 2871 aaKnown RBP17.4■□□□□ 0.38
SSBP4-211ENST00000601614 ADAMTS20P59510 1910 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 APBB3O95704 486 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 CYP3A5P20815 502 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 BCKDHBP21953 392 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 CDC25CP30307 473 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 GBP1P32455 592 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 IRX4P78413 519 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 MCL1Q07820 350 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 ST3GAL1Q11201 340 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 PMS2CLQ68D20 193 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 RINT1Q6NUQ1 792 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 C1orf186Q6ZWK4 172 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 KCNK18Q7Z418 384 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 C4orf32Q8N8J7 132 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 MAB21L3Q8N8X9 362 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 STKLD1Q8NE28 680 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 DEFB124Q8NES8 71 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 SENP8Q96LD8 212 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 PLEKHA5Q9HAU0 1116 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 TMEM9BQ9NQ34 198 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 HSFX1Q9UBD0 423 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 TBX20Q9UMR3 447 aa17.39■□□□□ 0.37
SSBP4-211ENST00000601614 UBQLN1Q9UMX0 589 aaKnown RBP17.39■□□□□ 0.37
SSBP4-211ENST00000601614 RBM19Q9Y4C8 960 aaKnown RBP17.39■□□□□ 0.37
SSBP4-211ENST00000601614 PP2D1A8MPX8 630 aa17.38■□□□□ 0.37
SSBP4-211ENST00000601614 LACTBL1A8MY62 500 aa17.38■□□□□ 0.37
SSBP4-211ENST00000601614 HYAL3O43820 417 aaPredicted RBP17.38■□□□□ 0.37
SSBP4-211ENST00000601614 DRD1P21728 446 aa17.38■□□□□ 0.37
SSBP4-211ENST00000601614 GJA4P35212 333 aa17.38■□□□□ 0.37
SSBP4-211ENST00000601614 FXR2P51116 673 aaKnown RBP eCLIP17.38■□□□□ 0.37
SSBP4-211ENST00000601614 LILRA4P59901 499 aa17.38■□□□□ 0.37
SSBP4-211ENST00000601614 NBR1Q14596 966 aa17.38■□□□□ 0.37
SSBP4-211ENST00000601614 KARSQ15046 597 aaKnown RBP17.38■□□□□ 0.37
SSBP4-211ENST00000601614 MGAT5BQ3V5L5 792 aa17.38■□□□□ 0.37
SSBP4-211ENST00000601614 SLC39A12Q504Y0 691 aa17.38■□□□□ 0.37
SSBP4-211ENST00000601614 TMEM161BQ8NDZ6 487 aa17.38■□□□□ 0.37
SSBP4-211ENST00000601614 P2RY13Q9BPV8 354 aa17.38■□□□□ 0.37
SSBP4-211ENST00000601614 NTPCRQ9BSD7 190 aaKnown RBP17.38■□□□□ 0.37
SSBP4-211ENST00000601614 TPSD1Q9BZJ3 242 aa17.38■□□□□ 0.37
SSBP4-211ENST00000601614 LRWD1Q9UFC0 647 aa17.38■□□□□ 0.37
SSBP4-211ENST00000601614 HELZP42694 1942 aaKnown RBP17.37■□□□□ 0.37
SSBP4-211ENST00000601614 CEP192Q8TEP8 1941 aa17.37■□□□□ 0.37
SSBP4-211ENST00000601614 KHNYNO15037 678 aaKnown RBP17.37■□□□□ 0.37
SSBP4-211ENST00000601614 F11P03951 625 aa17.37■□□□□ 0.37
SSBP4-211ENST00000601614 MAPTP10636 758 aaKnown RBP17.37■□□□□ 0.37
SSBP4-211ENST00000601614 HMGA1P17096 107 aaKnown RBP17.37■□□□□ 0.37
SSBP4-211ENST00000601614 DGKEP52429 567 aa17.37■□□□□ 0.37
SSBP4-211ENST00000601614 NLRP12P59046 1061 aa17.37■□□□□ 0.37
SSBP4-211ENST00000601614 TRIM29Q14134 588 aa17.37■□□□□ 0.37
SSBP4-211ENST00000601614 TXNDC8Q6A555 127 aa17.37■□□□□ 0.37
SSBP4-211ENST00000601614 ARMCX5Q6P1M9 558 aa17.37■□□□□ 0.37
SSBP4-211ENST00000601614 ZPBP2Q6X784 338 aa17.37■□□□□ 0.37
SSBP4-211ENST00000601614 LRRTM3Q86VH5 581 aa17.37■□□□□ 0.37
SSBP4-211ENST00000601614 SNX29Q8TEQ0 813 aa17.37■□□□□ 0.37
SSBP4-211ENST00000601614 DRC1Q96MC2 740 aa17.37■□□□□ 0.37
SSBP4-211ENST00000601614 GCNAQ96QF7 691 aa17.37■□□□□ 0.37
SSBP4-211ENST00000601614 ZCWPW1Q9H0M4 648 aa17.37■□□□□ 0.37
SSBP4-211ENST00000601614 SOBPA7XYQ1 873 aa17.36■□□□□ 0.37
SSBP4-211ENST00000601614 CLDN3O15551 220 aa17.36■□□□□ 0.37
SSBP4-211ENST00000601614 FAM189A1O60320 539 aa17.36■□□□□ 0.37
SSBP4-211ENST00000601614 CLTAP09496 248 aa17.36■□□□□ 0.37
SSBP4-211ENST00000601614 ODC1P11926 461 aa17.36■□□□□ 0.37
SSBP4-211ENST00000601614 CDC25AP30304 524 aa17.36■□□□□ 0.37
SSBP4-211ENST00000601614 AVPR1AP37288 418 aa17.36■□□□□ 0.37
SSBP4-211ENST00000601614 TUFMP49411 452 aaKnown RBP17.36■□□□□ 0.37
SSBP4-211ENST00000601614 RAD51AP2Q09MP3 1159 aa17.36■□□□□ 0.37
SSBP4-211ENST00000601614 STRN3Q13033 797 aa17.36■□□□□ 0.37
SSBP4-211ENST00000601614 VEPH1Q14D04 833 aa17.36■□□□□ 0.37
SSBP4-211ENST00000601614 ENOX2Q16206 610 aaKnown RBP17.36■□□□□ 0.37
SSBP4-211ENST00000601614 UAP1L1Q3KQV9 507 aa17.36■□□□□ 0.37
SSBP4-211ENST00000601614 FBXO43Q4G163 708 aa17.36■□□□□ 0.37
SSBP4-211ENST00000601614 TTC38Q5R3I4 469 aa17.36■□□□□ 0.37
SSBP4-211ENST00000601614 TDP1Q9NUW8 608 aa17.36■□□□□ 0.37
SSBP4-211ENST00000601614 KLK13Q9UKR3 277 aa17.36■□□□□ 0.37
SSBP4-211ENST00000601614 NBEAQ8NFP9 2946 aa17.36■□□□□ 0.37
SSBP4-211ENST00000601614 PLXND1Q9Y4D7 1925 aa17.35■□□□□ 0.37
SSBP4-211ENST00000601614 TAF4O00268 1085 aa17.35■□□□□ 0.37
SSBP4-211ENST00000601614 TADA3O75528 432 aa17.35■□□□□ 0.37
SSBP4-211ENST00000601614 CYP11A1P05108 521 aa17.35■□□□□ 0.37
SSBP4-211ENST00000601614 HAPLN1P10915 354 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms