RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 LPIN3Q9BQK8 851 aa22.88■■□□□ 1.25
PNKP-212ENST00000599454 ZHX3Q9H4I2 956 aa22.88■■□□□ 1.25
PNKP-212ENST00000599454 IL21Q9HBE4 155 aa22.88■■□□□ 1.25
PNKP-212ENST00000599454 STYXL1Q9Y6J8 313 aa22.88■■□□□ 1.25
PNKP-212ENST00000599454 CYB561D2O14569 222 aa22.87■■□□□ 1.25
PNKP-212ENST00000599454 PRAMEF12O95522 483 aa22.87■■□□□ 1.25
PNKP-212ENST00000599454 ATF6P18850 670 aa22.87■■□□□ 1.25
PNKP-212ENST00000599454 ACOT2P49753 483 aa22.87■■□□□ 1.25
PNKP-212ENST00000599454 MCM6Q14566 821 aa22.87■■□□□ 1.25
PNKP-212ENST00000599454 TAF12Q16514 161 aa22.87■■□□□ 1.25
PNKP-212ENST00000599454 CSRP2Q16527 193 aa22.87■■□□□ 1.25
PNKP-212ENST00000599454 ITPRIPL2Q3MIP1 535 aa22.87■■□□□ 1.25
PNKP-212ENST00000599454 C8orf34Q49A92 452 aa22.87■■□□□ 1.25
PNKP-212ENST00000599454 WDR44Q5JSH3 913 aa22.87■■□□□ 1.25
PNKP-212ENST00000599454 ADALQ6DHV7 355 aa22.87■■□□□ 1.25
PNKP-212ENST00000599454 Q6ZS52 159 aa22.87■■□□□ 1.25
PNKP-212ENST00000599454 LRRC15Q8TF66 581 aa22.87■■□□□ 1.25
PNKP-212ENST00000599454 PYM1Q9BRP8 204 aaKnown RBP22.87■■□□□ 1.25
PNKP-212ENST00000599454 SEMA4GQ9NTN9 838 aa22.87■■□□□ 1.25
PNKP-212ENST00000599454 DPP3Q9NY33 737 aa22.87■■□□□ 1.25
PNKP-212ENST00000599454 DCDC2BA2VCK2 349 aa22.86■■□□□ 1.25
PNKP-212ENST00000599454 SLC30A4O14863 429 aa22.86■■□□□ 1.25
PNKP-212ENST00000599454 NMT1P30419 496 aaKnown RBP22.86■■□□□ 1.25
PNKP-212ENST00000599454 DMWDQ09019 674 aa22.86■■□□□ 1.25
PNKP-212ENST00000599454 PON2Q15165 354 aa22.86■■□□□ 1.25
PNKP-212ENST00000599454 NT5DC4Q86YG4 428 aa22.86■■□□□ 1.25
PNKP-212ENST00000599454 LARP4BQ92615 738 aaKnown RBP22.86■■□□□ 1.25
PNKP-212ENST00000599454 HVCN1Q96D96 273 aa22.86■■□□□ 1.25
PNKP-212ENST00000599454 AGO2Q9UKV8 859 aaKnown RBP22.86■■□□□ 1.25
PNKP-212ENST00000599454 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.86■■□□□ 1.25
PNKP-212ENST00000599454 EML5Q05BV3 1969 aa22.85■■□□□ 1.25
PNKP-212ENST00000599454 SOBPA7XYQ1 873 aa22.85■■□□□ 1.25
PNKP-212ENST00000599454 ANKRD63C9JTQ0 380 aa22.85■■□□□ 1.25
PNKP-212ENST00000599454 HAPLN1P10915 354 aaPredicted RBP22.85■■□□□ 1.25
PNKP-212ENST00000599454 DDX6P26196 483 aaKnown RBP eCLIP22.85■■□□□ 1.25
PNKP-212ENST00000599454 CYP4F8P98187 520 aa22.85■■□□□ 1.25
PNKP-212ENST00000599454 KARSQ15046 597 aaKnown RBP22.85■■□□□ 1.25
PNKP-212ENST00000599454 SV2CQ496J9 727 aa22.85■■□□□ 1.25
PNKP-212ENST00000599454 PRR23CQ6ZRP0 262 aa22.85■■□□□ 1.25
PNKP-212ENST00000599454 WDR5BQ86VZ2 330 aa22.85■■□□□ 1.25
PNKP-212ENST00000599454 DCP1BQ8IZD4 617 aaKnown RBP22.85■■□□□ 1.25
PNKP-212ENST00000599454 CMTM8Q8IZV2 173 aa22.85■■□□□ 1.25
PNKP-212ENST00000599454 TTC8Q8TAM2 541 aa22.85■■□□□ 1.25
PNKP-212ENST00000599454 IL18RAPO95256 599 aa22.84■■□□□ 1.25
PNKP-212ENST00000599454 POSTNQ15063 836 aa22.84■■□□□ 1.25
PNKP-212ENST00000599454 HEATR6Q6AI08 1181 aaKnown RBP22.84■■□□□ 1.25
PNKP-212ENST00000599454 CEP68Q76N32 757 aa22.84■■□□□ 1.25
PNKP-212ENST00000599454 BRAPQ7Z569 592 aa22.84■■□□□ 1.25
PNKP-212ENST00000599454 KRI1Q8N9T8 703 aaKnown RBP22.84■■□□□ 1.25
PNKP-212ENST00000599454 ZNF560Q96MR9 790 aa22.84■■□□□ 1.25
PNKP-212ENST00000599454 CNTNAP3BQ96NU0 1288 aa22.84■■□□□ 1.25
PNKP-212ENST00000599454 SLC46A2Q9BY10 475 aa22.84■■□□□ 1.25
PNKP-212ENST00000599454 CNTNAP3Q9BZ76 1288 aa22.84■■□□□ 1.25
PNKP-212ENST00000599454 SMC3Q9UQE7 1217 aa22.84■■□□□ 1.25
PNKP-212ENST00000599454 ANAPC1Q9H1A4 1944 aa22.84■■□□□ 1.25
PNKP-212ENST00000599454 CCDC163A0A0D9SF12 145 aa22.83■■□□□ 1.25
PNKP-212ENST00000599454 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.83■■□□□ 1.25
PNKP-212ENST00000599454 DDIT3P35638 169 aa22.83■■□□□ 1.25
PNKP-212ENST00000599454 AVPR1AP37288 418 aa22.83■■□□□ 1.25
PNKP-212ENST00000599454 PNPLA4P41247 253 aa22.83■■□□□ 1.25
PNKP-212ENST00000599454 TNK2Q07912 1038 aa22.83■■□□□ 1.25
PNKP-212ENST00000599454 ZC2HC1CQ53FD0 456 aaPredicted RBP22.83■■□□□ 1.25
PNKP-212ENST00000599454 WSCD1Q658N2 575 aa22.83■■□□□ 1.25
PNKP-212ENST00000599454 LRRTM3Q86VH5 581 aa22.83■■□□□ 1.25
PNKP-212ENST00000599454 GIPC2Q8TF65 315 aa22.83■■□□□ 1.25
PNKP-212ENST00000599454 FAM83CQ9BQN1 747 aa22.83■■□□□ 1.25
PNKP-212ENST00000599454 KIF9Q9HAQ2 790 aa22.83■■□□□ 1.25
PNKP-212ENST00000599454 ABI2Q9NYB9 513 aaPredicted RBP22.83■■□□□ 1.25
PNKP-212ENST00000599454 PCDHB5Q9Y5E4 795 aa22.83■■□□□ 1.25
PNKP-212ENST00000599454 KPNA7A9QM74 516 aa22.82■■□□□ 1.24
PNKP-212ENST00000599454 ATG13O75143 517 aa22.82■■□□□ 1.24
PNKP-212ENST00000599454 ADRB1P08588 477 aa22.82■■□□□ 1.24
PNKP-212ENST00000599454 AMPD2Q01433 879 aa22.82■■□□□ 1.24
PNKP-212ENST00000599454 SRSF5Q13243 272 aaKnown RBP22.82■■□□□ 1.24
PNKP-212ENST00000599454 NFE2Q16621 373 aaPredicted RBP22.82■■□□□ 1.24
PNKP-212ENST00000599454 LARP1BQ659C4 914 aaKnown RBP22.82■■□□□ 1.24
PNKP-212ENST00000599454 ZNF720Q7Z2F6 126 aa22.82■■□□□ 1.24
PNKP-212ENST00000599454 FAM160A2Q8N612 972 aaPredicted RBP22.82■■□□□ 1.24
PNKP-212ENST00000599454 POMGNT1Q8WZA1 660 aa22.82■■□□□ 1.24
PNKP-212ENST00000599454 GKN1Q9NS71 199 aa22.82■■□□□ 1.24
PNKP-212ENST00000599454 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.82■■□□□ 1.24
PNKP-212ENST00000599454 MAP1BP46821 2468 aaKnown RBP22.82■■□□□ 1.24
PNKP-212ENST00000599454 TISP43B9A030 160 aa22.81■■□□□ 1.24
PNKP-212ENST00000599454 CSH1P0DML2 217 aa22.81■■□□□ 1.24
PNKP-212ENST00000599454 CSH2P0DML3 217 aa22.81■■□□□ 1.24
PNKP-212ENST00000599454 NLRP12P59046 1061 aa22.81■■□□□ 1.24
PNKP-212ENST00000599454 TSPY1Q01534 308 aa22.81■■□□□ 1.24
PNKP-212ENST00000599454 GRIN1Q05586 938 aa22.81■■□□□ 1.24
PNKP-212ENST00000599454 GRSF1Q12849 480 aaKnown RBP eCLIP22.81■■□□□ 1.24
PNKP-212ENST00000599454 BFSP1Q12934 665 aa22.81■■□□□ 1.24
PNKP-212ENST00000599454 RUNX3Q13761 415 aa22.81■■□□□ 1.24
PNKP-212ENST00000599454 TMEM196Q5HYL7 178 aa22.81■■□□□ 1.24
PNKP-212ENST00000599454 CRELD2Q6UXH1 353 aaPredicted RBP22.81■■□□□ 1.24
PNKP-212ENST00000599454 EFCAB13Q8IY85 973 aa22.81■■□□□ 1.24
PNKP-212ENST00000599454 DDX1Q92499 740 aaKnown RBP22.81■■□□□ 1.24
PNKP-212ENST00000599454 LOXL4Q96JB6 756 aa22.81■■□□□ 1.24
PNKP-212ENST00000599454 SMG9Q9H0W8 520 aaKnown RBP22.81■■□□□ 1.24
PNKP-212ENST00000599454 C2orf42Q9NWW7 574 aa22.81■■□□□ 1.24
PNKP-212ENST00000599454 SEL1LQ9UBV2 794 aa22.81■■□□□ 1.24
PNKP-212ENST00000599454 EXOC7Q9UPT5 735 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms