RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	C12orf42	Q96LP6	360 aa		11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	IER2	Q9BTL4	223 aa		11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	SELENOO	Q9BVL4	669 aa		11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ACTR5	Q9H9F9	607 aa	Predicted RBP	11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	KRT82	Q9NSB4	513 aa		11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ZNF148	Q9UQR1	794 aa		11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	L3MBTL1	Q9Y468	752 aa		11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ARFGEF1	Q9Y6D6	1849 aa		11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	PLA2G6	O60733	806 aa		11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	LCA5L	O95447	670 aa		11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	S100A1	P23297	94 aa		11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	TCF7	P36402	384 aa	Predicted RBP	11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	NAA35	Q5VZE5	725 aa		11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	PCNX4	Q63HM2	1172 aa		11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	NEK5	Q6P3R8	708 aa		11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ELMO3	Q96BJ8	720 aa		11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	PARVB	Q9HBI1	364 aa		11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ATAD3A	Q9NVI7	634 aa		11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335	SLC9A2	Q9UBY0	812 aa		11.94	□□□□□ -0.5
SUPT5H-216	ENST00000599335		H0Y3Z8	333 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	CCL5	P13501	91 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	AKR1A1	P14550	325 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	SOX5	P35711	763 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	CHKA	P35790	457 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	VAMP7	P51809	220 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	PSMC5	P62195	406 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	DLG4	P78352	724 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	DMP1	Q13316	513 aa	Predicted RBP	11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	RASA2	Q15283	850 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	CLPP	Q16740	277 aa	Predicted RBP	11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	CDR2L	Q86X02	465 aa	Predicted RBP	11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	XXYLT1	Q8NBI6	393 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	AP1M1	Q9BXS5	423 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	CCSER2	Q9H7U1	834 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	EPB41L5	Q9HCM4	733 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	SETD4	Q9NVD3	440 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	KCND2	Q9NZV8	630 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	C15orf41	Q9Y2V0	281 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	INO80B-WBP1	J3KQ70	363 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	FNTA	P49354	379 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	MAP3K7CL	P57077	242 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	USP46	P62068	366 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	HSDL1	Q3SXM5	330 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	SPOUT1	Q5T280	376 aa	Known RBP	11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	TMTC4	Q5T4D3	741 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ZNF746	Q6NUN9	644 aa	Predicted RBP	11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	WDR93	Q6P2C0	686 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	DAW1	Q8N136	415 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	KMT5A	Q9NQR1	393 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	GRID2IP	A4D2P6	1211 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	HEXIM1	O94992	359 aa	Known RBP	11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	GH1	P01241	217 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	PLS3	P13797	630 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	OSTN	P61366	133 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ANKRD49	Q8WVL7	239 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	POMGNT1	Q8WZA1	660 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	HSPBP1	Q9NZL4	362 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	PHF24	Q9UPV7	400 aa		11.93	□□□□□ -0.5
SUPT5H-216	ENST00000599335	DENND3	A2RUS2	1198 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	CYP2C9	P11712	490 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	MXI1	P50539	228 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	STAT5B	P51692	787 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	GALC	P54803	685 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	BPIFB4	P59827	614 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	SP2	Q02086	613 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	DEPTOR	Q8TB45	409 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	MKNK1	Q9BUB5	465 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	FLRT1	Q9NZU1	646 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	APEX2	Q9UBZ4	518 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	USP20	Q9Y2K6	914 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	UBIAD1	Q9Y5Z9	338 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ZMYM2	Q9UBW7	1377 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	TMEM221	A6NGB7	291 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	GOLGA8T	H3BQL2	631 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335		M0QZ92	97 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	RGS20	O76081	388 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	EN2	P19622	333 aa	Predicted RBP	11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	KRT76	Q01546	638 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	MUM1	Q2TAK8	710 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	INTS8	Q75QN2	995 aa	Known RBP	11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	PPFIBP2	Q8ND30	876 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ZSWIM2	Q8NEG5	633 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	STK33	Q9BYT3	514 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	STIM2	Q9P246	746 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	CTTNBP2NL	Q9P2B4	639 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	PCP4L1	A6NKN8	68 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	FOXN3	O00409	490 aa	Predicted RBP	11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	DDX3X	O00571	662 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	HNRNPDL	O14979	420 aa	Known RBP	11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	HNRNPR	O43390	633 aa	Known RBP	11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	TNNC1	P63316	161 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	FSCN1	Q16658	493 aa	Known RBP	11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	CCDC153	Q494R4	210 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	TLDC1	Q6P9B6	456 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	RSPH3	Q86UC2	560 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	CCDC63	Q8NA47	563 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	NLRP7	Q8WX94	980 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms