RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 RFC2P35250 354 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 C2CD6Q53TS8 623 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 WSCD1Q658N2 575 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 UNC93AQ86WB7 457 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 WDTC1Q8N5D0 677 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 RFFLQ8WZ73 363 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 UROC1Q96N76 676 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 CASD1Q96PB1 797 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.81■■□□□ 1.56
SYMPK-212ENST00000598896 STXBP5LQ9Y2K9 1186 aa24.81■■□□□ 1.56
SYMPK-212ENST00000598896 TSC2P49815 1807 aa24.8■■□□□ 1.56
SYMPK-212ENST00000598896 ALPK3Q96L96 1907 aa24.8■■□□□ 1.56
SYMPK-212ENST00000598896 I3L4J1 428 aa24.8■■□□□ 1.56
SYMPK-212ENST00000598896 O00370 1275 aa24.8■■□□□ 1.56
SYMPK-212ENST00000598896 KIF4AO95239 1232 aa24.8■■□□□ 1.56
SYMPK-212ENST00000598896 CSF2RAP15509 400 aa24.8■■□□□ 1.56
SYMPK-212ENST00000598896 GNL1P36915 607 aaPredicted RBP24.8■■□□□ 1.56
SYMPK-212ENST00000598896 NSFP46459 744 aaKnown RBP24.8■■□□□ 1.56
SYMPK-212ENST00000598896 NAP1L1P55209 391 aaKnown RBP24.8■■□□□ 1.56
SYMPK-212ENST00000598896 DENND1BQ6P3S1 775 aa24.8■■□□□ 1.56
SYMPK-212ENST00000598896 COLGALT2Q8IYK4 626 aa24.8■■□□□ 1.56
SYMPK-212ENST00000598896 C1orf131Q8NDD1 294 aaKnown RBP24.8■■□□□ 1.56
SYMPK-212ENST00000598896 SLC35G2Q8TBE7 412 aa24.8■■□□□ 1.56
SYMPK-212ENST00000598896 LPIN3Q9BQK8 851 aa24.8■■□□□ 1.56
SYMPK-212ENST00000598896 KANSL3Q9P2N6 904 aa24.8■■□□□ 1.56
SYMPK-212ENST00000598896 DNAJB4Q9UDY4 337 aa24.8■■□□□ 1.56
SYMPK-212ENST00000598896 LRFN2Q9ULH4 789 aa24.8■■□□□ 1.56
SYMPK-212ENST00000598896 COG5Q9UP83 839 aa24.8■■□□□ 1.56
SYMPK-212ENST00000598896 MED7O43513 233 aa24.79■■□□□ 1.56
SYMPK-212ENST00000598896 PDGFRBP09619 1106 aa24.79■■□□□ 1.56
SYMPK-212ENST00000598896 WARSP23381 471 aaKnown RBP24.79■■□□□ 1.56
SYMPK-212ENST00000598896 CDH5P33151 784 aaPredicted RBP24.79■■□□□ 1.56
SYMPK-212ENST00000598896 GPC5P78333 572 aa24.79■■□□□ 1.56
SYMPK-212ENST00000598896 SGO2Q562F6 1265 aa24.79■■□□□ 1.56
SYMPK-212ENST00000598896 MON1BQ7L1V2 547 aa24.79■■□□□ 1.56
SYMPK-212ENST00000598896 MCOLN2Q8IZK6 566 aa24.79■■□□□ 1.56
SYMPK-212ENST00000598896 ABI1Q8IZP0 508 aa24.79■■□□□ 1.56
SYMPK-212ENST00000598896 TRIM58Q8NG06 486 aa24.79■■□□□ 1.56
SYMPK-212ENST00000598896 PCDHGC5Q9Y5F6 944 aa24.79■■□□□ 1.56
SYMPK-212ENST00000598896 GABRDO14764 452 aa24.79■■□□□ 1.56
SYMPK-212ENST00000598896 LSM8O95777 96 aaKnown RBP24.79■■□□□ 1.56
SYMPK-212ENST00000598896 RAG1P15918 1043 aa24.79■■□□□ 1.56
SYMPK-212ENST00000598896 NOP2P46087 812 aaKnown RBP24.79■■□□□ 1.56
SYMPK-212ENST00000598896 BRCC3P46736 316 aa24.79■■□□□ 1.56
SYMPK-212ENST00000598896 RNASELQ05823 741 aaKnown RBP24.79■■□□□ 1.56
SYMPK-212ENST00000598896 IKBKEQ14164 716 aa24.79■■□□□ 1.56
SYMPK-212ENST00000598896 ZNF653Q96CK0 615 aa24.79■■□□□ 1.56
SYMPK-212ENST00000598896 SNX25Q9H3E2 840 aa24.79■■□□□ 1.56
SYMPK-212ENST00000598896 HCSTQ9UBK5 93 aa24.79■■□□□ 1.56
SYMPK-212ENST00000598896 TIMM13Q9Y5L4 95 aaPredicted RBP24.79■■□□□ 1.56
SYMPK-212ENST00000598896 FNDC1Q4ZHG4 1894 aaPredicted RBP24.78■■□□□ 1.56
SYMPK-212ENST00000598896 GRID2IPA4D2P6 1211 aa24.78■■□□□ 1.56
SYMPK-212ENST00000598896 MICAL2O94851 1124 aa24.78■■□□□ 1.56
SYMPK-212ENST00000598896 PTP4A2Q12974 167 aa24.78■■□□□ 1.56
SYMPK-212ENST00000598896 CNGA2Q16280 664 aa24.78■■□□□ 1.56
SYMPK-212ENST00000598896 DSTYKQ6XUX3 929 aa24.78■■□□□ 1.56
SYMPK-212ENST00000598896 PHF13Q86YI8 300 aaPredicted RBP24.78■■□□□ 1.56
SYMPK-212ENST00000598896 NPAS4Q8IUM7 802 aa24.78■■□□□ 1.56
SYMPK-212ENST00000598896 TMEM35BQ8NCS4 154 aa24.78■■□□□ 1.56
SYMPK-212ENST00000598896 C11orf70Q9BRQ4 267 aa24.78■■□□□ 1.56
SYMPK-212ENST00000598896 FAM49BQ9NUQ9 324 aa24.78■■□□□ 1.56
SYMPK-212ENST00000598896 CYTH4Q9UIA0 394 aa24.78■■□□□ 1.56
SYMPK-212ENST00000598896 GTF3C4Q9UKN8 822 aa24.78■■□□□ 1.56
SYMPK-212ENST00000598896 ENC1O14682 589 aa24.77■■□□□ 1.56
SYMPK-212ENST00000598896 PALMO75781 387 aa24.77■■□□□ 1.56
SYMPK-212ENST00000598896 PPP1R26Q5T8A7 1209 aaPredicted RBP24.77■■□□□ 1.56
SYMPK-212ENST00000598896 LLGL2Q6P1M3 1020 aa24.77■■□□□ 1.56
SYMPK-212ENST00000598896 DCLRE1AQ6PJP8 1040 aa24.77■■□□□ 1.56
SYMPK-212ENST00000598896 CRYBG2Q8N1P7 616 aa24.77■■□□□ 1.56
SYMPK-212ENST00000598896 ALS2CR12Q96Q35 445 aa24.77■■□□□ 1.56
SYMPK-212ENST00000598896 LHX5Q9H2C1 402 aa24.77■■□□□ 1.56
SYMPK-212ENST00000598896 KIAA1257Q9ULG3 409 aa24.77■■□□□ 1.56
SYMPK-212ENST00000598896 CYP1A2P05177 515 aa24.77■■□□□ 1.56
SYMPK-212ENST00000598896 MFSD5Q6N075 450 aa24.77■■□□□ 1.56
SYMPK-212ENST00000598896 MMS22LQ6ZRQ5 1243 aa24.77■■□□□ 1.56
SYMPK-212ENST00000598896 TPCN2Q8NHX9 752 aa24.77■■□□□ 1.56
SYMPK-212ENST00000598896 GOLPH3Q9H4A6 298 aa24.77■■□□□ 1.56
SYMPK-212ENST00000598896 TSPAN16Q9UKR8 245 aa24.77■■□□□ 1.56
SYMPK-212ENST00000598896 CTAGE9A4FU28 777 aa24.76■■□□□ 1.55
SYMPK-212ENST00000598896 M0QYV0 167 aa24.76■■□□□ 1.55
SYMPK-212ENST00000598896 MMP8P22894 467 aa24.76■■□□□ 1.55
SYMPK-212ENST00000598896 RRM1P23921 792 aa24.76■■□□□ 1.55
SYMPK-212ENST00000598896 ACAT1P24752 427 aaKnown RBP24.76■■□□□ 1.55
SYMPK-212ENST00000598896 CCDC142Q17RM4 750 aa24.76■■□□□ 1.55
SYMPK-212ENST00000598896 LCLAT1Q6UWP7 414 aa24.76■■□□□ 1.55
SYMPK-212ENST00000598896 LRRC57Q8N9N7 239 aa24.76■■□□□ 1.55
SYMPK-212ENST00000598896 RSPH1Q8WYR4 309 aa24.76■■□□□ 1.55
SYMPK-212ENST00000598896 NAPGQ99747 312 aaPredicted RBP24.76■■□□□ 1.55
SYMPK-212ENST00000598896 ZNF518BQ9C0D4 1074 aa24.76■■□□□ 1.55
SYMPK-212ENST00000598896 NRDE2Q9H7Z3 1164 aa24.76■■□□□ 1.55
SYMPK-212ENST00000598896 ADAM22Q9P0K1 906 aa24.76■■□□□ 1.55
SYMPK-212ENST00000598896 CNOT8Q9UFF9 292 aaKnown RBP24.76■■□□□ 1.55
SYMPK-212ENST00000598896 COL4A6Q14031 1691 aa24.76■■□□□ 1.55
SYMPK-212ENST00000598896 M0QZQ0 153 aa24.75■■□□□ 1.55
SYMPK-212ENST00000598896 UPP2O95045 317 aa24.75■■□□□ 1.55
SYMPK-212ENST00000598896 ATP1A1P05023 1023 aaKnown RBP24.75■■□□□ 1.55
SYMPK-212ENST00000598896 FAM163BP0C2L3 166 aa24.75■■□□□ 1.55
SYMPK-212ENST00000598896 OR1G1P47890 313 aa24.75■■□□□ 1.55
SYMPK-212ENST00000598896 PSMC1P62191 440 aaKnown RBP24.75■■□□□ 1.55
SYMPK-212ENST00000598896 TCEAL1Q15170 157 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms