RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 CT47A1Q5JQC4 288 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF1-216ENST00000598587 CCDC183Q5T5S1 534 aa12.91□□□□□ -0.34
ARHGEF1-216ENST00000598587 IQCEQ6IPM2 695 aa12.91□□□□□ -0.34
ARHGEF1-216ENST00000598587 TDRD5Q8NAT2 981 aaKnown RBP12.91□□□□□ -0.34
ARHGEF1-216ENST00000598587 FBXL13Q8NEE6 735 aa12.91□□□□□ -0.34
ARHGEF1-216ENST00000598587 OR10T2Q8NGX3 314 aa12.91□□□□□ -0.34
ARHGEF1-216ENST00000598587 XYLT2Q9H1B5 865 aa12.91□□□□□ -0.34
ARHGEF1-216ENST00000598587 CDH9Q9ULB4 789 aa12.91□□□□□ -0.34
ARHGEF1-216ENST00000598587 USTQ9Y2C2 406 aa12.91□□□□□ -0.34
ARHGEF1-216ENST00000598587 PCDHB5Q9Y5E4 795 aa12.91□□□□□ -0.34
ARHGEF1-216ENST00000598587 DENND4CQ5VZ89 1909 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 GABRDO14764 452 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 CCL16O15467 120 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 VNN1O95497 513 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 WEE2P0C1S8 567 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 EPHB3P54753 998 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 STX17P56962 302 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 MCCD1P59942 119 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 PPP3CAQ08209 521 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 VEPH1Q14D04 833 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 WDR44Q5JSH3 913 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 INTS6LQ5JSJ4 861 aaKnown RBP12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 C1orf220Q5T0J3 134 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 SASS6Q6UVJ0 657 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 C4orf50Q6ZRC1 276 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 OTOP3Q7RTS5 596 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 FAM114A1Q8IWE2 563 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 GJD3Q8N144 294 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 PLCD3Q8N3E9 789 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 OR6B3Q8NGW1 331 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 ZNF707Q96C28 371 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 RPGRIP1Q96KN7 1286 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 PGLYRP2Q96PD5 576 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 DUSP9Q99956 384 aaKnown RBP12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 COL25A1Q9BXS0 654 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 WDR6Q9NNW5 1121 aaKnown RBP12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 ABCB6Q9NP58 842 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 YIPF1Q9Y548 306 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 OBSL1O75147 1896 aa12.9□□□□□ -0.34
ARHGEF1-216ENST00000598587 NUP210Q8TEM1 1887 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 LOC730098B7Z3J9 87 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 TNFRSF10AO00220 468 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 ASS1P00966 412 aaKnown RBP12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 PTPN2P17706 415 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 ERCC5P28715 1186 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 GNL1P36915 607 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 MARSP56192 900 aaKnown RBP12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 NOP14P78316 857 aaKnown RBP12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 TWF1Q12792 350 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 PABPC1LQ4VXU2 614 aaKnown RBP12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 SCARA5Q6ZMJ2 495 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 LIMS2Q7Z4I7 341 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 ITIH5Q86UX2 942 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 SPATA2LQ8IUW3 424 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 TTC39CQ8N584 583 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 LEMD2Q8NC56 503 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 KBTBD7Q8WVZ9 684 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 FUBP3Q96I24 572 aaKnown RBP eCLIP12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 FAXDC2Q96IV6 333 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 TNIP3Q96KP6 325 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 ZNF512Q96ME7 567 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 TMEM209Q96SK2 561 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 SEPT5Q99719 369 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 RTP3Q9BQQ7 232 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 SYT15Q9BQS2 421 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 SRRTQ9BXP5 876 aaKnown RBP12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 NIF3L1Q9GZT8 377 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 FAM124BQ9H5Z6 455 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 ABI2Q9NYB9 513 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 ASB3Q9Y575 518 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 ZFP37Q9Y6Q3 630 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 GREB1Q4ZG55 1949 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 DOCK8Q8NF50 2099 aa12.89□□□□□ -0.35
ARHGEF1-216ENST00000598587 ATP8B3O60423 1300 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 PATJQ8NI35 1801 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 DOCK6Q96HP0 2047 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 NOTCH4Q99466 2003 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 C19orf67A6NJJ6 358 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 A8MXQ7 604 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 ZNF197O14709 1029 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 SEC24AO95486 1093 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 FGF19O95750 216 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 FSHRP23945 695 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 ACAT1P24752 427 aaKnown RBP12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 GBP2P32456 591 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 RPL10AP62906 217 aaKnown RBP12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 DUSP4Q13115 394 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 TAF12Q16514 161 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 DPCR1Q3MIW9 517 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 MGAT5BQ3V5L5 792 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 CYP4A22Q5TCH4 519 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 RBM43Q6ZSC3 357 aaKnown RBP12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 PDZD4Q76G19 769 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 GET4Q7L5D6 327 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 GRASPQ7Z6J2 395 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 FAM200AQ8TCP9 573 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 TAS1R2Q8TE23 839 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 SLC35C1Q96A29 364 aa12.88□□□□□ -0.35
ARHGEF1-216ENST00000598587 SMYD3Q9H7B4 428 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms