RNA–Protein interactions for RNA: ENST00000596365.5

LINC00649-208, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 682 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-208	ENST00000596365	DHX32	Q7L7V1	743 aa	Known RBP	9.29	□□□□□ -0.92
LINC00649-208	ENST00000596365	SYT12	Q8IV01	421 aa		9.29	□□□□□ -0.92
LINC00649-208	ENST00000596365	TPH2	Q8IWU9	490 aa		9.29	□□□□□ -0.92
LINC00649-208	ENST00000596365	APPL2	Q8NEU8	664 aa		9.29	□□□□□ -0.92
LINC00649-208	ENST00000596365	TSTD1	Q8NFU3	115 aa		9.29	□□□□□ -0.92
LINC00649-208	ENST00000596365	PRR7	Q8TB68	274 aa		9.29	□□□□□ -0.92
LINC00649-208	ENST00000596365	TCEANC2	Q96MN5	208 aa		9.29	□□□□□ -0.92
LINC00649-208	ENST00000596365	POLR3F	Q9H1D9	316 aa	Predicted RBP	9.29	□□□□□ -0.92
LINC00649-208	ENST00000596365	C2orf40	Q9H1Z8	148 aa		9.29	□□□□□ -0.92
LINC00649-208	ENST00000596365	ATXN3L	Q9H3M9	355 aa		9.29	□□□□□ -0.92
LINC00649-208	ENST00000596365	ANKEF1	Q9NU02	776 aa		9.29	□□□□□ -0.92
LINC00649-208	ENST00000596365	SLC38A7	Q9NVC3	462 aa		9.29	□□□□□ -0.92
LINC00649-208	ENST00000596365	PCDHA4	Q9UN74	947 aa		9.29	□□□□□ -0.92
LINC00649-208	ENST00000596365	ASB3	Q9Y575	518 aa		9.29	□□□□□ -0.92
LINC00649-208	ENST00000596365	NUB1	Q9Y5A7	615 aa		9.29	□□□□□ -0.92
LINC00649-208	ENST00000596365	CYSRT1	A8MQ03	144 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	PODXL	O00592	558 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	TNFRSF10B	O14763	440 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	SLC37A4	O43826	429 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	OPHN1	O60890	802 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	PRAMEF12	O95522	483 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	PRB1	P04280	392 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	PLA2G2A	P14555	144 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	BCKDHB	P21953	392 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	ALDH1A3	P47895	512 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	GALK1	P51570	392 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	FAM193A	P78312	1265 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	CYP4A11	Q02928	519 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	MAPK6	Q16659	721 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	RNF20	Q5VTR2	975 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	CDCA2	Q69YH5	1023 aa	Predicted RBP	9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	NCAPH2	Q6IBW4	605 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	GAREM2	Q75VX8	874 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	LPCAT2	Q7L5N7	544 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	CCDC26	Q8TAB7	109 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	MDM1	Q8TC05	714 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	ADAMTS14	Q8WXS8	1223 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	P2RY13	Q9BPV8	354 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	FAM83C	Q9BQN1	747 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	RNF26	Q9BY78	433 aa	Predicted RBP	9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	TPSD1	Q9BZJ3	242 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	DNAJC25	Q9H1X3	360 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	KDM4C	Q9H3R0	1056 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	TASP1	Q9H6P5	420 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	KCNMB3	Q9NPA1	279 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	HPS4	Q9NQG7	708 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	HECTD1	Q9ULT8	2610 aa		9.28	□□□□□ -0.92
LINC00649-208	ENST00000596365	PCDH15	Q96QU1	1955 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	SMIM28	A0A1B0GU29	152 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	ACKR2	O00590	384 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	MARCH6	O60337	910 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	GABRR2	P28476	465 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	RPL9	P32969	192 aa	Known RBP	9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	HOXD12	P35452	270 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	SOX4	Q06945	474 aa	Predicted RBP	9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	PSMD2	Q13200	908 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	LMBRD2	Q68DH5	695 aa	Predicted RBP	9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	ZNF605	Q86T29	641 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	ITIH5	Q86UX2	942 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	RASSF3	Q86WH2	238 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	BLID	Q8IZY5	108 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	BEST2	Q8NFU1	509 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	PSMG2	Q969U7	264 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	CHFR	Q96EP1	664 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	SUSD3	Q96L08	255 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	CNOT6L	Q96LI5	555 aa	Known RBP	9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	GTPBP2	Q9BX10	602 aa	Known RBP	9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	SLC26A6	Q9BXS9	759 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	OXCT2	Q9BYC2	517 aa	Predicted RBP	9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	EBF3	Q9H4W6	596 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	FBRSL1	Q9HCM7	1045 aa	Known RBP	9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	TOPORS	Q9NS56	1045 aa	Predicted RBP	9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	DKK4	Q9UBT3	224 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	MBD1	Q9UIS9	605 aa	Predicted RBP	9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	ZMYM5	Q9UJ78	669 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	PCDHB9	Q9Y5E1	797 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	RAI2	Q9Y5P3	530 aa		9.27	□□□□□ -0.93
LINC00649-208	ENST00000596365	NID2	Q14112	1375 aa		9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	OBSL1	O75147	1896 aa		9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	OTOL1	A6NHN0	477 aa	Predicted RBP	9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	C1QL1	O75973	258 aa		9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	SLITRK3	O94933	977 aa		9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	LYPLA2	O95372	231 aa		9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	CFI	P05156	583 aa		9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	GCFC2	P16383	781 aa	Known RBP	9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	MARCKS	P29966	332 aa	Predicted RBP	9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	MCM4	P33991	863 aa		9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	RARRES1	P49788	294 aa		9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	YARS	P54577	528 aa	Known RBP	9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	GFPT1	Q06210	699 aa	Predicted RBP	9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	DUSP4	Q13115	394 aa		9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	TRIP6	Q15654	476 aa	Known RBP	9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	DUOXA1	Q1HG43	343 aa		9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	INF2	Q27J81	1249 aa		9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	SPDYC	Q5MJ68	293 aa		9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	EEF1DP3	Q658K8	133 aa		9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	DIEXF	Q68CQ4	756 aa	Known RBP	9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	TRIM68	Q6AZZ1	485 aa		9.26	□□□□□ -0.93
LINC00649-208	ENST00000596365	ANO7	Q6IWH7	933 aa		9.26	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms