RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 RPGRIP1Q96KN7 1286 aa16.06■□□□□ 0.16
SCN1B-204ENST00000596348 PI4K2AQ9BTU6 479 aa16.06■□□□□ 0.16
SCN1B-204ENST00000596348 SMYD3Q9H7B4 428 aa16.06■□□□□ 0.16
SCN1B-204ENST00000596348 TMEM8AQ9HCN3 771 aa16.06■□□□□ 0.16
SCN1B-204ENST00000596348 WDR6Q9NNW5 1121 aaKnown RBP16.06■□□□□ 0.16
SCN1B-204ENST00000596348 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.06■□□□□ 0.16
SCN1B-204ENST00000596348 HCFC1R1Q9NWW0 138 aa16.06■□□□□ 0.16
SCN1B-204ENST00000596348 NXF1Q9UBU9 619 aaKnown RBP16.06■□□□□ 0.16
SCN1B-204ENST00000596348 ARMCX3Q9UH62 379 aaPredicted RBP16.06■□□□□ 0.16
SCN1B-204ENST00000596348 RWDD2AQ9UIY3 292 aa16.06■□□□□ 0.16
SCN1B-204ENST00000596348 MAFFQ9ULX9 164 aa16.06■□□□□ 0.16
SCN1B-204ENST00000596348 CLUHO75153 1309 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 LOC730098B7Z3J9 87 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 TACC1O75410 805 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 MBD3O95983 291 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 POU2F2P09086 479 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 LMO2P25791 158 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 LHX1P48742 406 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 NLRP12P59046 1061 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 TNNC1P63316 161 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 DUSP4Q13115 394 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 CBWD6Q4V339 395 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 ZNF667Q5HYK9 610 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 INTS6LQ5JSJ4 861 aaKnown RBP16.05■□□□□ 0.16
SCN1B-204ENST00000596348 CBWD3Q5JTY5 395 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 CBWD5Q5RIA9 395 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 TCERG1LQ5VWI1 586 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 SCARA5Q6ZMJ2 495 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 RTL10Q7L3V2 364 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 GRASPQ7Z6J2 395 aaPredicted RBP16.05■□□□□ 0.16
SCN1B-204ENST00000596348 GJD3Q8N144 294 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 SEMA4DQ92854 862 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 ACBD6Q9BR61 282 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 SRRTQ9BXP5 876 aaKnown RBP16.05■□□□□ 0.16
SCN1B-204ENST00000596348 SDCBP2Q9H190 292 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 PIDD1Q9HB75 910 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 APOBEC3GQ9HC16 384 aaKnown RBP16.05■□□□□ 0.16
SCN1B-204ENST00000596348 SLC27A5Q9Y2P5 690 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 YIPF1Q9Y548 306 aa16.05■□□□□ 0.16
SCN1B-204ENST00000596348 PTPRDP23468 1912 aa16.04■□□□□ 0.16
SCN1B-204ENST00000596348 C2CD4DB7Z1M9 353 aa16.04■□□□□ 0.16
SCN1B-204ENST00000596348 N4BP1O75113 896 aaKnown RBP16.04■□□□□ 0.16
SCN1B-204ENST00000596348 ATP2C2O75185 946 aa16.04■□□□□ 0.16
SCN1B-204ENST00000596348 XYLBO75191 536 aa16.04■□□□□ 0.16
SCN1B-204ENST00000596348 SOAT2O75908 522 aa16.04■□□□□ 0.16
SCN1B-204ENST00000596348 RAP1GAPP47736 663 aa16.04■□□□□ 0.16
SCN1B-204ENST00000596348 MXI1P50539 228 aa16.04■□□□□ 0.16
SCN1B-204ENST00000596348 CDH8P55286 799 aa16.04■□□□□ 0.16
SCN1B-204ENST00000596348 MYL7Q01449 175 aa16.04■□□□□ 0.16
SCN1B-204ENST00000596348 TSPY1Q01534 308 aa16.04■□□□□ 0.16
SCN1B-204ENST00000596348 SGSM1Q2NKQ1 1148 aa16.04■□□□□ 0.16
SCN1B-204ENST00000596348 CCDC40Q4G0X9 1142 aa16.04■□□□□ 0.16
SCN1B-204ENST00000596348 KRT39Q6A163 491 aa16.04■□□□□ 0.16
SCN1B-204ENST00000596348 FRMD5Q7Z6J6 570 aa16.04■□□□□ 0.16
SCN1B-204ENST00000596348 CEP72Q9P209 647 aa16.04■□□□□ 0.16
SCN1B-204ENST00000596348 DNMT3BQ9UBC3 853 aaKnown RBP16.04■□□□□ 0.16
SCN1B-204ENST00000596348 MYBPHLA2RUH7 354 aa16.03■□□□□ 0.16
SCN1B-204ENST00000596348 DLL1O00548 723 aa16.03■□□□□ 0.16
SCN1B-204ENST00000596348 CLSTN1O94985 981 aa16.03■□□□□ 0.16
SCN1B-204ENST00000596348 LRG1P02750 347 aa16.03■□□□□ 0.16
SCN1B-204ENST00000596348 PDGFRBP09619 1106 aa16.03■□□□□ 0.16
SCN1B-204ENST00000596348 PCSK1P29120 753 aa16.03■□□□□ 0.16
SCN1B-204ENST00000596348 SSTR3P32745 418 aaPredicted RBP16.03■□□□□ 0.16
SCN1B-204ENST00000596348 ASPAP45381 313 aa16.03■□□□□ 0.16
SCN1B-204ENST00000596348 PSMC1P62191 440 aaKnown RBP16.03■□□□□ 0.16
SCN1B-204ENST00000596348 NOP14P78316 857 aaKnown RBP16.03■□□□□ 0.16
SCN1B-204ENST00000596348 TWF1Q12792 350 aa16.03■□□□□ 0.16
SCN1B-204ENST00000596348 DCP1BQ8IZD4 617 aaKnown RBP16.03■□□□□ 0.16
SCN1B-204ENST00000596348 TAF4BQ92750 862 aa16.03■□□□□ 0.16
SCN1B-204ENST00000596348 KHSRPQ92945 711 aaKnown RBP eCLIP16.03■□□□□ 0.16
SCN1B-204ENST00000596348 LPIN3Q9BQK8 851 aa16.03■□□□□ 0.16
SCN1B-204ENST00000596348 SYT15Q9BQS2 421 aa16.03■□□□□ 0.16
SCN1B-204ENST00000596348 DNAJC25Q9H1X3 360 aa16.03■□□□□ 0.16
SCN1B-204ENST00000596348 METTL14Q9HCE5 456 aaKnown RBP16.03■□□□□ 0.16
SCN1B-204ENST00000596348 CRTAC1Q9NQ79 661 aa16.03■□□□□ 0.16
SCN1B-204ENST00000596348 ABI2Q9NYB9 513 aaPredicted RBP16.03■□□□□ 0.16
SCN1B-204ENST00000596348 TMEM63CQ9P1W3 806 aa16.03■□□□□ 0.16
SCN1B-204ENST00000596348 GTF3C4Q9UKN8 822 aa16.03■□□□□ 0.16
SCN1B-204ENST00000596348 NRG2O14511 850 aaPredicted RBP16.02■□□□□ 0.16
SCN1B-204ENST00000596348 STX10O60499 249 aa16.02■□□□□ 0.16
SCN1B-204ENST00000596348 FAM163BP0C2L3 166 aa16.02■□□□□ 0.16
SCN1B-204ENST00000596348 GNL1P36915 607 aaPredicted RBP16.02■□□□□ 0.16
SCN1B-204ENST00000596348 MARSP56192 900 aaKnown RBP16.02■□□□□ 0.16
SCN1B-204ENST00000596348 CCDC183Q5T5S1 534 aa16.02■□□□□ 0.16
SCN1B-204ENST00000596348 FAM171BQ6P995 826 aa16.02■□□□□ 0.16
SCN1B-204ENST00000596348 IRF2BP1Q8IU81 584 aa16.02■□□□□ 0.16
SCN1B-204ENST00000596348 TRIM59Q8IWR1 403 aa16.02■□□□□ 0.16
SCN1B-204ENST00000596348 FBXL13Q8NEE6 735 aa16.02■□□□□ 0.16
SCN1B-204ENST00000596348 OR6B3Q8NGW1 331 aa16.02■□□□□ 0.16
SCN1B-204ENST00000596348 MYADMQ96S97 322 aa16.02■□□□□ 0.16
SCN1B-204ENST00000596348 BCO2Q9BYV7 579 aa16.02■□□□□ 0.16
SCN1B-204ENST00000596348 SNX25Q9H3E2 840 aa16.02■□□□□ 0.16
SCN1B-204ENST00000596348 DPEP3Q9H4B8 488 aa16.02■□□□□ 0.16
SCN1B-204ENST00000596348 HSFX1Q9UBD0 423 aa16.02■□□□□ 0.16
SCN1B-204ENST00000596348 CDH9Q9ULB4 789 aa16.02■□□□□ 0.16
SCN1B-204ENST00000596348 COQ4Q9Y3A0 265 aa16.02■□□□□ 0.16
SCN1B-204ENST00000596348 RHOP08100 348 aa16.01■□□□□ 0.15
SCN1B-204ENST00000596348 HAPLN1P10915 354 aaPredicted RBP16.01■□□□□ 0.15
SCN1B-204ENST00000596348 ATF6P18850 670 aa16.01■□□□□ 0.15
SCN1B-204ENST00000596348 FMO5P49326 533 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms