RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 TRIM61Q5EBN2 209 aa14.96□□□□□ -0.01
SHKBP1-208ENST00000595726 ARMCX6Q7L4S7 300 aa14.96□□□□□ -0.01
SHKBP1-208ENST00000595726 APBB1IPQ7Z5R6 666 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-208ENST00000595726 PIP4P1Q86T03 277 aa14.96□□□□□ -0.01
SHKBP1-208ENST00000595726 CMTM8Q8IZV2 173 aa14.96□□□□□ -0.01
SHKBP1-208ENST00000595726 GIPC2Q8TF65 315 aa14.96□□□□□ -0.01
SHKBP1-208ENST00000595726 USP13Q92995 863 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-208ENST00000595726 TNFRSF25Q93038 417 aa14.96□□□□□ -0.01
SHKBP1-208ENST00000595726 TCHPQ9BT92 498 aa14.96□□□□□ -0.01
SHKBP1-208ENST00000595726 TMEM60Q9H2L4 133 aa14.96□□□□□ -0.01
SHKBP1-208ENST00000595726 TMEM74BQ9NUR3 256 aa14.96□□□□□ -0.01
SHKBP1-208ENST00000595726 GON4LQ3T8J9 2241 aa14.96□□□□□ -0.02
SHKBP1-208ENST00000595726 THADAQ6YHU6 1953 aa14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 CCDC169A6NNP5 214 aa14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 FGF19O95750 216 aa14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 ENGP17813 658 aa14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 NMT1P30419 496 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 GJA4P35212 333 aa14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 SCAPQ12770 1279 aa14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 ANO7Q6IWH7 933 aa14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 TAS1R3Q7RTX0 852 aa14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 USP37Q86T82 979 aa14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 TTC30AQ86WT1 665 aa14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 FRMD1Q8N878 549 aa14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 MAB21L3Q8N8X9 362 aa14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 TSTD1Q8NFU3 115 aa14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 HNRNPLLQ8WVV9 542 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 RLN3Q8WXF3 142 aa14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 BRMS1Q9HCU9 246 aa14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 TUFT1Q9NNX1 390 aa14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 MBD1Q9UIS9 605 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 TBX20Q9UMR3 447 aa14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 NUP210Q8TEM1 1887 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-208ENST00000595726 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 FAM221BA6H8Z2 402 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 OR6C75A6NL08 312 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 ABLIM1O14639 778 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 NEMFO60524 1076 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 ATF6P18850 670 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 PTGER3P43115 390 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 GUCY2FP51841 1108 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 FOSBP53539 338 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 PEX3P56589 373 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 SEMA3BQ13214 749 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 RABEP1Q15276 862 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 FBXO43Q4G163 708 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 DSTYKQ6XUX3 929 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 TMEM150AQ86TG1 271 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 ITIH5Q86UX2 942 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 TMEFF1Q8IYR6 380 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 TTC16Q8NEE8 873 aa14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 ZSCAN31Q96LW9 406 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 SEPT5Q99719 369 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 LLPHQ9BRT6 129 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 UPF2Q9HAU5 1272 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 CIZ1Q9ULV3 898 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-208ENST00000595726 MCF2P10911 925 aa14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 CDC25CP30307 473 aa14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 AVPR1AP37288 418 aa14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 SEC13P55735 322 aa14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 AMPD2Q01433 879 aa14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 LMAN2Q12907 356 aa14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 BFSP1Q12934 665 aa14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 TRIM29Q14134 588 aa14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 ECM1Q16610 540 aa14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 MGAT5BQ3V5L5 792 aa14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 C2orf27AQ580R0 203 aa14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 OVOS1Q6IE37 1185 aa14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 DIS3L2Q8IYB7 885 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 CCDC33Q8N5R6 958 aa14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 GCNAQ96QF7 691 aa14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 NUSAP1Q9BXS6 441 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 MRPL4Q9BYD3 311 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 TDP1Q9NUW8 608 aa14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 EVLQ9UI08 416 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 ASXL3Q9C0F0 2248 aa14.93□□□□□ -0.02
SHKBP1-208ENST00000595726 ATXN2Q99700 1313 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 CFAP46Q8IYW2 2715 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 BTBD18B2RXH4 712 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 PPEF2O14830 753 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 PROZP22891 400 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 NPTX2P47972 431 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 TXNDC8Q6A555 127 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 CC2D1AQ6P1N0 951 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 MPZL3Q6UWV2 235 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 RAB44Q7Z6P3 723 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 RASSF3Q86WH2 238 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 STKLD1Q8NE28 680 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 MDGA1Q8NFP4 955 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 OR2I1PQ8NGU4 316 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 OR10T2Q8NGX3 314 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 KIFAP3Q92845 792 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 CD101Q93033 1021 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 ACDQ96AP0 544 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 LRIG1Q96JA1 1093 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 FNBP1Q96RU3 617 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 GTPBP2Q9BX10 602 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 OXCT2Q9BYC2 517 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 ECT2Q9H8V3 914 aa14.92□□□□□ -0.02
SHKBP1-208ENST00000595726 APC2O95996 2303 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms