RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ZFATQ9P243 1243 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 MORF4L1Q9UBU8 362 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 SH3BP1Q9Y3L3 701 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 UNCXA6NJT0 531 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 ASS1P00966 412 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 HOXC6P09630 235 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 TMEM191BP0C7N4 346 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 CXCL8P10145 99 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 AP3M2P53677 418 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 SCARA5Q6ZMJ2 495 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 TRPM8Q7Z2W7 1104 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 C2orf69Q8N8R5 385 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 NAP1L3Q99457 506 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 KATNBL1Q9H079 304 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 EVPLQ92817 2033 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 RTN3O95197 1032 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 MAPK4P31152 587 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 PEX5P50542 639 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 ROR2Q01974 943 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 LLGL1Q15334 1064 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 THEMIS2Q5TEJ8 643 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 SPRYD7Q5W111 196 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 ABRAQ8N0Z2 381 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 TMEM130Q8N3G9 435 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 DRAXINQ8NBI3 349 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 MAML3Q96JK9 1138 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 C11orf70Q9BRQ4 267 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 C16orf70Q9BSU1 422 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 YIPF3Q9GZM5 350 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 WNT8AQ9H1J5 351 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 CDT1Q9H211 546 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 RRAGCQ9HB90 399 aa18.06■□□□□ 0.48
SHKBP1-205ENST00000594973 H3BRB1 525 aa18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 CYP1A1P04798 512 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 PYGMP11217 842 aa18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 SMPD1P17405 629 aa18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 PHKA2P46019 1235 aa18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 PAPOLAP51003 745 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 CENPCQ03188 943 aa18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 GRM1Q13255 1194 aa18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 CD101Q93033 1021 aa18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 CPB2Q96IY4 423 aa18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 PARK7Q99497 189 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 SLITRK6Q9H5Y7 841 aa18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 TUT1Q9H6E5 874 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 SAMD15Q9P1V8 674 aa18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 PLXNB2O15031 1838 aa18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 KRT19P08727 400 aa18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 WEE2P0C1S8 567 aa18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 ZFAND2BQ8WV99 257 aa18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 TRIM31Q9BZY9 425 aa18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 CCDC134Q9H6E4 229 aa18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 MROH7Q68CQ1 1323 aa18.05■□□□□ 0.48
SHKBP1-205ENST00000594973 RBM47A0AV96 593 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 GPR25O00155 361 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 LMNB2Q03252 620 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 GRB14Q14449 540 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 ZNF699Q32M78 642 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 SEL1L2Q5TEA6 688 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 UBLCP1Q8WVY7 318 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 TRIM51Q9BSJ1 452 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 PRMT7Q9NVM4 692 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 ADAM22Q9P0K1 906 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 TNFSF13BQ9Y275 285 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 PLXNA1Q9UIW2 1896 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 DNAH12Q6ZR08 3092 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 DAPK3O43293 454 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 TNNC2P02585 160 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 FKBP1BP68106 108 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 SURF1Q15526 300 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 SGSM1Q2NKQ1 1148 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 KRT71Q3SY84 523 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 DAB2IPQ5VWQ8 1189 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 MON1BQ7L1V2 547 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 PLEKHH3Q7Z736 793 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 ZNF467Q7Z7K2 595 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 PPP1R13LQ8WUF5 828 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 NLRP7Q8WX94 980 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 TINF2Q9BSI4 451 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 NIF3L1Q9GZT8 377 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 DPH5Q9H2P9 285 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 RPF1Q9H9Y2 349 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 CISHQ9NSE2 258 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 NXF1Q9UBU9 619 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 CNTN6Q9UQ52 1028 aa18.04■□□□□ 0.48
SHKBP1-205ENST00000594973 MAGEB2O15479 319 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 NOMO3P69849 1222 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 ACVR2BQ13705 512 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 ZC3H12AQ5D1E8 599 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 MTHFD1LQ6UB35 978 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 GBP7Q8N8V2 638 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 NPLOC4Q8TAT6 608 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 ZNF606Q8WXB4 792 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 EMID1Q96A84 441 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 ANKRD36BP1Q96IX9 119 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 TSC22D3Q99576 134 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 NSRP1Q9H0G5 558 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 PAPOLBQ9NRJ5 636 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 CPA4Q9UI42 421 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 PCDHA3Q9Y5H8 950 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms