RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 KLHL29Q96CT2 875 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 NLRP4Q96MN2 994 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 KRT12Q99456 494 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 AGPAT1Q99943 283 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 PI4K2AQ9BTU6 479 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 RBAKQ9NYW8 714 aaPredicted RBP16.28■□□□□ 0.2
PNKP-204ENST00000594661 CES2O00748 559 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 PRKCBP05771 671 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 GSTA2P09210 222 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 PCK1P35558 622 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 ACVR2BQ13705 512 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 ZPBP2Q6X784 338 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 SLFN11Q7Z7L1 901 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 PALB2Q86YC2 1186 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 ZBTB8OSQ8IWT0 167 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 SLC35G2Q8TBE7 412 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 KCNV2Q8TDN2 545 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 RFFLQ8WZ73 363 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 FNBP1Q96RU3 617 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 RPS6KC1Q96S38 1066 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 C16orf70Q9BSU1 422 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 MRPL4Q9BYD3 311 aaKnown RBP16.28■□□□□ 0.2
PNKP-204ENST00000594661 VCXQ9H320 206 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 OSGEPQ9NPF4 335 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 TAS2R14Q9NYV8 317 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 NCANO14594 1321 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 SART1O43290 800 aaKnown RBP16.27■□□□□ 0.2
PNKP-204ENST00000594661 RAD51CO43502 376 aa16.27■□□□□ 0.2
PNKP-204ENST00000594661 TNNI1P19237 187 aa16.27■□□□□ 0.2
PNKP-204ENST00000594661 GBP1P32455 592 aa16.27■□□□□ 0.2
PNKP-204ENST00000594661 POLE2P56282 527 aa16.27■□□□□ 0.2
PNKP-204ENST00000594661 PPARDQ03181 441 aa16.27■□□□□ 0.2
PNKP-204ENST00000594661 DUSP28Q4G0W2 176 aa16.27■□□□□ 0.2
PNKP-204ENST00000594661 TDRD10Q5VZ19 366 aaKnown RBP16.27■□□□□ 0.2
PNKP-204ENST00000594661 ZBTB33Q86T24 672 aa16.27■□□□□ 0.2
PNKP-204ENST00000594661 LCA5Q86VQ0 697 aa16.27■□□□□ 0.2
PNKP-204ENST00000594661 LRRC34Q8IZ02 419 aa16.27■□□□□ 0.2
PNKP-204ENST00000594661 USP38Q8NB14 1042 aa16.27■□□□□ 0.2
PNKP-204ENST00000594661 NT5C1BQ96P26 610 aa16.27■□□□□ 0.2
PNKP-204ENST00000594661 ACO2Q99798 780 aaKnown RBP16.27■□□□□ 0.2
PNKP-204ENST00000594661 ABHD16BQ9H3Z7 469 aa16.27■□□□□ 0.2
PNKP-204ENST00000594661 TMCO1Q9UM00 188 aa16.27■□□□□ 0.2
PNKP-204ENST00000594661 ZNF510Q9Y2H8 683 aa16.27■□□□□ 0.2
PNKP-204ENST00000594661 EVPLQ92817 2033 aa16.27■□□□□ 0.2
PNKP-204ENST00000594661 DOCK3Q8IZD9 2030 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 CLDN3O15551 220 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 CEP104O60308 925 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 FAM189A1O60320 539 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 TOM1L1O75674 476 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 LDHAP00338 332 aaKnown RBP16.27■□□□□ 0.19
PNKP-204ENST00000594661 TNFSF9P41273 254 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 MFAP3P55082 362 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 TNNC1P63316 161 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 PRPF4BQ13523 1007 aaKnown RBP16.27■□□□□ 0.19
PNKP-204ENST00000594661 TAF1CQ15572 869 aaPredicted RBP16.27■□□□□ 0.19
PNKP-204ENST00000594661 MAPK6Q16659 721 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 ZNF484Q5JVG2 852 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 MORN1Q5T089 497 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 RNF220Q5VTB9 566 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 SAPCD2Q86UD0 394 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 FAM71AQ8IYT1 594 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 MDM1Q8TC05 714 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 FBF1Q8TES7 1133 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 SHC3Q92529 594 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 NSRP1Q9H0G5 558 aaKnown RBP16.27■□□□□ 0.19
PNKP-204ENST00000594661 C2orf40Q9H1Z8 148 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 ACP6Q9NPH0 428 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 GMEB1Q9Y692 573 aa16.27■□□□□ 0.19
PNKP-204ENST00000594661 CNTNAP2Q9UHC6 1331 aa16.26■□□□□ 0.19
PNKP-204ENST00000594661 MANSC4A6NHS7 340 aaPredicted RBP16.26■□□□□ 0.19
PNKP-204ENST00000594661 C4BPAP04003 597 aaKnown RBP16.26■□□□□ 0.19
PNKP-204ENST00000594661 MMEP08473 750 aa16.26■□□□□ 0.19
PNKP-204ENST00000594661 ZACNQ401N2 412 aa16.26■□□□□ 0.19
PNKP-204ENST00000594661 IRGCQ6NXR0 463 aa16.26■□□□□ 0.19
PNKP-204ENST00000594661 OR6J1Q8NGC5 347 aa16.26■□□□□ 0.19
PNKP-204ENST00000594661 ELAC2Q9BQ52 826 aaKnown RBP16.26■□□□□ 0.19
PNKP-204ENST00000594661 THAP2Q9H0W7 228 aa16.26■□□□□ 0.19
PNKP-204ENST00000594661 MINDY3Q9H8M7 445 aa16.26■□□□□ 0.19
PNKP-204ENST00000594661 RNPEPL1Q9HAU8 725 aa16.26■□□□□ 0.19
PNKP-204ENST00000594661 TMEM59LQ9UK28 342 aa16.26■□□□□ 0.19
PNKP-204ENST00000594661 STXBP5LQ9Y2K9 1186 aa16.26■□□□□ 0.19
PNKP-204ENST00000594661 ANKRD62A6NC57 917 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 CYP26A1O43174 497 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 B4GALT5O43286 388 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 SGPL1O95470 568 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 MMP3P08254 477 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 CHN1P15882 459 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 CALB2P22676 271 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 PEX5P50542 639 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 TFDP1Q14186 410 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 HLTFQ14527 1009 aaKnown RBP eCLIP16.25■□□□□ 0.19
PNKP-204ENST00000594661 PRAMEF19Q5SWL8 479 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 NT5DC3Q86UY8 548 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 LINC01465Q8N7H1 131 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 DHX38Q92620 1227 aaKnown RBP16.25■□□□□ 0.19
PNKP-204ENST00000594661 FAM136AQ96C01 138 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 ARHGEF26Q96DR7 871 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 FLRT1Q9NZU1 646 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 AMFRQ9UKV5 643 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 H3BRB1 525 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms