RNA–Protein interactions for RNA: ENST00000593959.1

SYMPK-204, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-204ENST00000593959 COL4A3Q01955 1670 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 A0A1W2PRU2 124 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 GOLGA6L4A6NEF3 574 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 FAM170BA6NMN3 283 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 ITGB3P05106 788 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 POLR2BP30876 1174 aaKnown RBP17.74■□□□□ 0.43
SYMPK-204ENST00000593959 VIPR2P41587 438 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 RPS9P46781 194 aaKnown RBP17.74■□□□□ 0.43
SYMPK-204ENST00000593959 UBE2HP62256 183 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 TFAMQ00059 246 aaKnown RBP17.74■□□□□ 0.43
SYMPK-204ENST00000593959 DNM1Q05193 864 aaKnown RBP17.74■□□□□ 0.43
SYMPK-204ENST00000593959 FCHO2Q0JRZ9 810 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 ITIH5Q86UX2 942 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 SPPL2BQ8TCT7 592 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 IRF7Q92985 503 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 NKD2Q969F2 451 aaPredicted RBP17.74■□□□□ 0.43
SYMPK-204ENST00000593959 HPS3Q969F9 1004 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 RSPRY1Q96DX4 576 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 IL21Q9HBE4 155 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 PDE11AQ9HCR9 933 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 HEBP1Q9NRV9 189 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 SIX4Q9UIU6 781 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 RCOR1Q9UKL0 485 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 PCDHA7Q9UN72 937 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 AGAP1Q9UPQ3 857 aa17.74■□□□□ 0.43
SYMPK-204ENST00000593959 GOLGA8IPA6NC78 632 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 GOLGA8JA6NMD2 632 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 TGFB1I1O43294 461 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 SOAT2O75908 522 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 HAPLN1P10915 354 aaPredicted RBP17.73■□□□□ 0.43
SYMPK-204ENST00000593959 SNRPFP62306 86 aaKnown RBP17.73■□□□□ 0.43
SYMPK-204ENST00000593959 GRM2Q14416 872 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 RESP18Q5W5W9 173 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 ZNF852Q6ZMS4 543 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 MAMSTRQ6ZN01 415 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 TPRG1Q6ZUI0 275 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 TMEM86AQ8N2M4 240 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 PDCL2Q8N4E4 241 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 LEO1Q8WVC0 666 aaPredicted RBP17.73■□□□□ 0.43
SYMPK-204ENST00000593959 DHX58Q96C10 678 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 PKMYT1Q99640 499 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 ACBD6Q9BR61 282 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 BCO2Q9BYV7 579 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 PCIF1Q9H4Z3 704 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 BRD9Q9H8M2 597 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 KIAA1586Q9HCI6 787 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 INTS13Q9NVM9 706 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 L1RE1Q9UN81 338 aa17.73■□□□□ 0.43
SYMPK-204ENST00000593959 COL4A2P08572 1712 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 DMXL1Q9Y485 3027 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 ZNF233A6NK53 670 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 GABRDO14764 452 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 POLR2DO15514 142 aaKnown RBP17.72■□□□□ 0.43
SYMPK-204ENST00000593959 SP9P0CG40 484 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 CD72P21854 359 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 TARSP26639 723 aaKnown RBP17.72■□□□□ 0.43
SYMPK-204ENST00000593959 RBP5P82980 135 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 SURF1Q15526 300 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 BMT2Q1RMZ1 405 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 ZNF528Q3MIS6 628 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 FOXD4L6Q3SYB3 417 aaPredicted RBP17.72■□□□□ 0.43
SYMPK-204ENST00000593959 FAM26FQ5R3K3 315 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 FOXD4L3Q6VB84 417 aaPredicted RBP17.72■□□□□ 0.43
SYMPK-204ENST00000593959 UNC13DQ70J99 1090 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 CBWD2Q8IUF1 395 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 DCP1BQ8IZD4 617 aaKnown RBP17.72■□□□□ 0.43
SYMPK-204ENST00000593959 CSGALNACT2Q8N6G5 542 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 TOP6BLQ8N6T0 577 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 SPATA32Q96LK8 384 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 LRRC3BQ96PB8 259 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 ABCB6Q9NP58 842 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 TMLHEQ9NVH6 421 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 OBP2AQ9NY56 170 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 FBXO4Q9UKT5 387 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 MRPS17Q9Y2R5 130 aaKnown RBP17.72■□□□□ 0.43
SYMPK-204ENST00000593959 PTPRJQ12913 1337 aa17.72■□□□□ 0.43
SYMPK-204ENST00000593959 OTOGLQ3ZCN5 2332 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 PVALEFA0A1B0GWK0 134 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 HEPACAM2A8MVW5 462 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 MAN2B1O00754 1011 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 HMGA1P17096 107 aaKnown RBP17.71■□□□□ 0.43
SYMPK-204ENST00000593959 GDI1P31150 447 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 ASIC1P78348 528 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 UBXN2BQ14CS0 331 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 NFE2Q16621 373 aaPredicted RBP17.71■□□□□ 0.43
SYMPK-204ENST00000593959 STXBP5Q5T5C0 1151 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 DPH6Q7L8W6 267 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 ARID3BQ8IVW6 561 aaPredicted RBP17.71■□□□□ 0.43
SYMPK-204ENST00000593959 OR5B17Q8NGF7 314 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 SCFD1Q8WVM8 642 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 NELL1Q92832 810 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 FAM84AQ96KN4 292 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 SEPT5Q99719 369 aaPredicted RBP17.71■□□□□ 0.43
SYMPK-204ENST00000593959 LPIN3Q9BQK8 851 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 MTMR12Q9C0I1 747 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 AGPAT3Q9NRZ7 376 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 HSPBP1Q9NZL4 362 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 ZMYM5Q9UJ78 669 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 PCDHB5Q9Y5E4 795 aa17.71■□□□□ 0.43
SYMPK-204ENST00000593959 DCHS1Q96JQ0 3298 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms