RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 SP100P23497 879 aaPredicted RBP12.7□□□□□ -0.38
H3F3B-212ENST00000592643 GTF2H1P32780 548 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 PPP1R2P41236 205 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 CCR2P41597 374 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 MARSP56192 900 aaKnown RBP12.7□□□□□ -0.38
H3F3B-212ENST00000592643 STIM1Q13586 685 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 SLC5A9Q2M3M2 681 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 UVSSAQ2YD98 709 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 ZNF699Q32M78 642 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 INTS6LQ5JSJ4 861 aaKnown RBP12.7□□□□□ -0.38
H3F3B-212ENST00000592643 FAM171BQ6P995 826 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 DPH6Q7L8W6 267 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 GRASPQ7Z6J2 395 aaPredicted RBP12.7□□□□□ -0.38
H3F3B-212ENST00000592643 FRMD5Q7Z6J6 570 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 SMG7Q92540 1137 aaKnown RBP12.7□□□□□ -0.38
H3F3B-212ENST00000592643 ACBD6Q9BR61 282 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 SRRTQ9BXP5 876 aaKnown RBP12.7□□□□□ -0.38
H3F3B-212ENST00000592643 OXCT2Q9BYC2 517 aaPredicted RBP12.7□□□□□ -0.38
H3F3B-212ENST00000592643 MMRN2Q9H8L6 949 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 CYP4F11Q9HBI6 524 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 TMEM30AQ9NV96 361 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 NXF1Q9UBU9 619 aaKnown RBP12.7□□□□□ -0.38
H3F3B-212ENST00000592643 PRKAG3Q9UGI9 489 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 HMGXB4Q9UGU5 601 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 ARMCX3Q9UH62 379 aaPredicted RBP12.7□□□□□ -0.38
H3F3B-212ENST00000592643 COQ4Q9Y3A0 265 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 YIPF1Q9Y548 306 aa12.7□□□□□ -0.38
H3F3B-212ENST00000592643 C2orf16Q68DN1 1984 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 PHACTR2O75167 634 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 MOSPD3O75425 235 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 PDGFRBP09619 1106 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 HNRNPA1P09651 372 aaKnown RBP eCLIP12.69□□□□□ -0.38
H3F3B-212ENST00000592643 KRT13P13646 458 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 ATF6P18850 670 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 MTHFRP42898 656 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 GPR15P49685 360 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 PSMC1P62191 440 aaKnown RBP12.69□□□□□ -0.38
H3F3B-212ENST00000592643 TWF1Q12792 350 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 TRPC3Q13507 836 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 PPM1LQ5SGD2 360 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 ATAT1Q5SQI0 421 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 LIN9Q5TKA1 542 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 KRT39Q6A163 491 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 CES5AQ6NT32 575 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 SCARA5Q6ZMJ2 495 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 METTL23Q86XA0 190 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 GJD3Q8N144 294 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 LMO3Q8TAP4 145 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 ITFG1Q8TB96 612 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 SPATA18Q8TC71 538 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 WHAMMQ8TF30 809 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 TATDN2Q93075 761 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 SYAP1Q96A49 352 aaPredicted RBP12.69□□□□□ -0.38
H3F3B-212ENST00000592643 RPGRIP1Q96KN7 1286 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 TWNKQ96RR1 684 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 MYADMQ96S97 322 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 MMS19Q96T76 1030 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 ARID3AQ99856 593 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 BCO2Q9BYV7 579 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 GTF3C4Q9UKN8 822 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 DOCK6Q96HP0 2047 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 NOTCH4Q99466 2003 aa12.69□□□□□ -0.38
H3F3B-212ENST00000592643 CLUHO75153 1309 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 DENND4AQ7Z401 1863 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 BICDL2A1A5D9 508 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 GOLGA6L22H0YM25 854 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 FAM163BP0C2L3 166 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 PIK3CAP42336 1068 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 LHX1P48742 406 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 MXI1P50539 228 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 CACNA2D1P54289 1103 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 NOP14P78316 857 aaKnown RBP12.68□□□□□ -0.38
H3F3B-212ENST00000592643 SGSM1Q2NKQ1 1148 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 DCAF17Q5H9S7 520 aaPredicted RBP12.68□□□□□ -0.38
H3F3B-212ENST00000592643 PRSS36Q5K4E3 855 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 CYP26C1Q6V0L0 522 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 C11orf57Q6ZUT1 292 aaPredicted RBP12.68□□□□□ -0.38
H3F3B-212ENST00000592643 PAQR9Q6ZVX9 377 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 RTL10Q7L3V2 364 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 TMC8Q8IU68 726 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 HS6ST3Q8IZP7 471 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 THEM5Q8N1Q8 247 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 STKLD1Q8NE28 680 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 TCEAL4Q96EI5 215 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 RIPOR3Q96MK2 946 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 NECTIN4Q96NY8 510 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 RAB20Q9NX57 234 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 DPP7Q9UHL4 492 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 MAFFQ9ULX9 164 aa12.68□□□□□ -0.38
H3F3B-212ENST00000592643 MTCL1Q9Y4B5 1905 aaKnown RBP12.68□□□□□ -0.38
H3F3B-212ENST00000592643 PRRG1O14668 218 aa12.67□□□□□ -0.38
H3F3B-212ENST00000592643 PMM2O15305 246 aa12.67□□□□□ -0.38
H3F3B-212ENST00000592643 MBD3O95983 291 aa12.67□□□□□ -0.38
H3F3B-212ENST00000592643 RHOP08100 348 aa12.67□□□□□ -0.38
H3F3B-212ENST00000592643 HAPLN1P10915 354 aaPredicted RBP12.67□□□□□ -0.38
H3F3B-212ENST00000592643 CYP2F1P24903 491 aa12.67□□□□□ -0.38
H3F3B-212ENST00000592643 ERCC5P28715 1186 aaPredicted RBP12.67□□□□□ -0.38
H3F3B-212ENST00000592643 GNL1P36915 607 aaPredicted RBP12.67□□□□□ -0.38
H3F3B-212ENST00000592643 FMO5P49326 533 aa12.67□□□□□ -0.38
H3F3B-212ENST00000592643 EPHA5P54756 1037 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms