RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 ANO7Q6IWH7 933 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 TMEM270Q6UE05 265 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 FNBP1Q96RU3 617 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 FAM167BQ9BTA0 163 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 APOBEC3GQ9HC16 384 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 ARHGAP28Q9P2N2 729 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 TCEAL9Q9UHQ7 104 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 RABGEF1Q9UJ41 708 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 PCDHB4Q9Y5E5 795 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 ABLIM1O14639 778 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 KRT1P04264 644 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 TCF4P15884 667 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 ATF7P17544 494 aaPredicted RBP15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 KRT4P19013 534 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 TNNI1P19237 187 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 MARK3P27448 753 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 PIK3CAP42336 1068 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 RPL7AP62424 266 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 MAPK6Q16659 721 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 PLEKHG4Q58EX7 1191 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 FYB2Q5VWT5 728 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 CLNKQ7Z7G1 428 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 CEP170P1Q96L14 293 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 DHRS4Q9BTZ2 278 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 DCLRE1BQ9H816 532 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 FARP1Q9Y4F1 1045 aaPredicted RBP15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 PCDHA10Q9Y5I2 948 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 ARID2Q68CP9 1835 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 CNTNAP1P78357 1384 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 hCG_1818297A0A087WSY0 165 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 LINGO3P0C6S8 592 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 MMP8P22894 467 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 WNT7BP56706 349 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 MTA1Q13330 715 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 ADGRD1Q6QNK2 874 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 PCGF5Q86SE9 256 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 OSBPL1AQ9BXW6 950 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 ANKFY1Q9P2R3 1169 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 ZNF70Q9UC06 446 aaPredicted RBP15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 STYXL1Q9Y6J8 313 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 IVNS1ABPQ9Y6Y0 642 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 CLUHO75153 1309 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 ABCD1P33897 745 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 PTDSS1P48651 473 aaKnown RBP15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 ZNF252P-AS1Q0IIN9 211 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 MTDHQ86UE4 582 aaKnown RBP15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 MCPH1Q8NEM0 835 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 BICD1Q96G01 975 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 VPS11Q9H270 941 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 KANSL3Q9P2N6 904 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 TCRBV5S1A1TA0A578 114 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 CLRN2A0PK11 232 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 ZNF862O60290 1169 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 TROVE2P10155 538 aaKnown RBP eCLIP15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 MYCLP12524 364 aaPredicted RBP15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 ACADSP16219 412 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 RPS6P62753 249 aaKnown RBP15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 NOP14P78316 857 aaKnown RBP15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 TFDP3Q5H9I0 405 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 NAIF1Q69YI7 327 aaPredicted RBP15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 CAPN12Q6ZSI9 719 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 SEPT12Q8IYM1 358 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 RBBP8NLQ8NC74 664 aaPredicted RBP15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 TTC8Q8TAM2 541 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 MZB1Q8WU39 189 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 PDCD2LQ9BRP1 358 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 TUBB6Q9BUF5 446 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 NPHS2Q9NP85 383 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 XPNPEP1Q9NQW7 623 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 IRAK4Q9NWZ3 460 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 NUMBLQ9Y6R0 609 aa15.64■□□□□ 0.09
SMARCA4-219ENST00000592604 H0YCG3 227 aa15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 TM9SF1O15321 606 aa15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 ENTPD5O75356 428 aa15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 DGAT1O75907 488 aa15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 TBXAS1P24557 533 aaPredicted RBP15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 ADRA1DP25100 572 aa15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 HIF1AQ16665 826 aa15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 C4orf50Q6ZRC1 276 aa15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 LMNTD2Q8IXW0 634 aa15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 SLC35B2Q8TB61 432 aa15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 ALKBH8Q96BT7 664 aaKnown RBP15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 MIPEPQ99797 713 aa15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 SNCAIPQ9Y6H5 919 aa15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 PTPRJQ12913 1337 aa15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 SSTR3P32745 418 aaPredicted RBP15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 PHBP35232 272 aa15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 CDKN2BP42772 138 aa15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 MRPS35P82673 323 aaKnown RBP15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 CPXCR1Q8N123 301 aa15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 SUPT20HQ8NEM7 779 aa15.63■□□□□ 0.09
SMARCA4-219ENST00000592604 YDJCA8MPS7 323 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 CCDC22O60826 627 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 GLRA2P23416 452 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 LIG4P49917 911 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 NLRP11P59045 1033 aaKnown RBP15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 ZFYVE27Q5T4F4 411 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 TRIM68Q6AZZ1 485 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 ATP11CQ8NB49 1132 aa15.62■□□□□ 0.09
SMARCA4-219ENST00000592604 ZNF483Q8TF39 744 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms