RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 MMRN2Q9H8L6 949 aa10.41□□□□□ -0.74
TPM4-215ENST00000592138 CYP3A43Q9HB55 503 aa10.41□□□□□ -0.74
TPM4-215ENST00000592138 MAN1C1Q9NR34 630 aa10.41□□□□□ -0.74
TPM4-215ENST00000592138 DDX43Q9NXZ2 648 aaKnown RBP10.41□□□□□ -0.74
TPM4-215ENST00000592138 CDH9Q9ULB4 789 aa10.41□□□□□ -0.74
TPM4-215ENST00000592138 BARX2Q9UMQ3 279 aaPredicted RBP10.41□□□□□ -0.74
TPM4-215ENST00000592138 TSC2P49815 1807 aa10.41□□□□□ -0.74
TPM4-215ENST00000592138 TCF20Q9UGU0 1960 aaKnown RBP10.41□□□□□ -0.74
TPM4-215ENST00000592138 SMTNL1A8MU46 457 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 KCNJ18B7U540 433 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 ZMYND10O75800 440 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 HNRNPA1P09651 372 aaKnown RBP eCLIP10.4□□□□□ -0.74
TPM4-215ENST00000592138 CPB1P15086 417 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 ZNF18P17022 549 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 KCNA5P22460 613 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 MTIF2P46199 727 aaKnown RBP10.4□□□□□ -0.74
TPM4-215ENST00000592138 ZNF165P49910 485 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 DLX2Q07687 328 aaPredicted RBP10.4□□□□□ -0.74
TPM4-215ENST00000592138 INCA1Q0VD86 236 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 SMAD4Q13485 552 aaKnown RBP10.4□□□□□ -0.74
TPM4-215ENST00000592138 KCNJ12Q14500 433 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 NCAPHQ15003 741 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 MAPRE1Q15691 268 aaKnown RBP10.4□□□□□ -0.74
TPM4-215ENST00000592138 NFE2Q16621 373 aaPredicted RBP10.4□□□□□ -0.74
TPM4-215ENST00000592138 INTS6LQ5JSJ4 861 aaKnown RBP10.4□□□□□ -0.74
TPM4-215ENST00000592138 LIN9Q5TKA1 542 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 LLGL2Q6P1M3 1020 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 FAM171BQ6P995 826 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 SYCE2Q6PIF2 218 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 UNC93AQ86WB7 457 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 PALB2Q86YC2 1186 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 SPPL2BQ8TCT7 592 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 FUBP3Q96I24 572 aaKnown RBP eCLIP10.4□□□□□ -0.74
TPM4-215ENST00000592138 FAM81BQ96LP2 452 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 PKMYT1Q99640 499 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 TUBGCP2Q9BSJ2 902 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 S1PR5Q9H228 398 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 ADAM7Q9H2U9 754 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 SNX25Q9H3E2 840 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 APOBEC3GQ9HC16 384 aaKnown RBP10.4□□□□□ -0.74
TPM4-215ENST00000592138 ABCB6Q9NP58 842 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 SAMSN1Q9NSI8 373 aaKnown RBP10.4□□□□□ -0.74
TPM4-215ENST00000592138 NXF1Q9UBU9 619 aaKnown RBP10.4□□□□□ -0.74
TPM4-215ENST00000592138 CD207Q9UJ71 328 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 FAM50BQ9Y247 325 aa10.4□□□□□ -0.74
TPM4-215ENST00000592138 MTMR11A4FU01 709 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 LRRC10BA6NIK2 292 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 C8AP07357 584 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 TRIM21P19474 475 aaKnown RBP10.39□□□□□ -0.75
TPM4-215ENST00000592138 TBXAS1P24557 533 aaPredicted RBP10.39□□□□□ -0.75
TPM4-215ENST00000592138 ELF1P32519 619 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 GNL1P36915 607 aaPredicted RBP10.39□□□□□ -0.75
TPM4-215ENST00000592138 MRPS5P82675 430 aaKnown RBP10.39□□□□□ -0.75
TPM4-215ENST00000592138 RBM10P98175 930 aaKnown RBP10.39□□□□□ -0.75
TPM4-215ENST00000592138 CFAP221Q4G0U5 840 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 VWA3BQ502W6 1294 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 SLC39A12Q504Y0 691 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 MIIPQ5JXC2 388 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 SPOPLQ6IQ16 392 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 OSTM1Q86WC4 334 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 GLYCTKQ8IVS8 523 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 LMO3Q8TAP4 145 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 SUSD6Q92537 303 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 JAKMIP2Q96AA8 810 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 TNIP3Q96KP6 325 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 CEP295NLQ96MC4 621 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 NECTIN4Q96NY8 510 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 MRPL45Q9BRJ2 306 aaKnown RBP10.39□□□□□ -0.75
TPM4-215ENST00000592138 PI4K2AQ9BTU6 479 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 DNAI2Q9GZS0 605 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 NDST4Q9H3R1 872 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 SMYD3Q9H7B4 428 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 FANCLQ9NW38 375 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 POLIQ9UNA4 740 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 SCN1AP35498 2009 aa10.39□□□□□ -0.75
TPM4-215ENST00000592138 BRWD1Q9NSI6 2320 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 A8MXQ7 604 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 H3BQ06 376 aaPredicted RBP10.38□□□□□ -0.75
TPM4-215ENST00000592138 CLSTN1O94985 981 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 VNN2O95498 520 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 TPM2P07951 284 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 OR4Q2P0C623 313 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 LMO2P25791 158 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 TUFMP49411 452 aaKnown RBP10.38□□□□□ -0.75
TPM4-215ENST00000592138 ARPP19P56211 112 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 YWHAEP62258 255 aaKnown RBP10.38□□□□□ -0.75
TPM4-215ENST00000592138 GCNT1Q02742 428 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 ADCY1Q08828 1119 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 PLD1Q13393 1074 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 CUL2Q13617 745 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 EXOC3L4Q17RC7 722 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 PPM1LQ5SGD2 360 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 CES5AQ6NT32 575 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 SCARA5Q6ZMJ2 495 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 RNF19BQ6ZMZ0 732 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 GBP6Q6ZN66 633 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 C4orf50Q6ZRC1 276 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 EP400NLQ6ZTU2 488 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 ENOSF1Q7L5Y1 443 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 GPR149Q86SP6 731 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms