RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TEAD2Q15562 447 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 ZC2HC1CQ53FD0 456 aaPredicted RBP11.26□□□□□ -0.61
VPS4B-207ENST00000591519 ARMCX5Q6P1M9 558 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 CRELD2Q6UXH1 353 aaPredicted RBP11.26□□□□□ -0.61
VPS4B-207ENST00000591519 DNAJB7Q7Z6W7 309 aaPredicted RBP11.26□□□□□ -0.61
VPS4B-207ENST00000591519 KRI1Q8N9T8 703 aaKnown RBP11.26□□□□□ -0.61
VPS4B-207ENST00000591519 ATAD1Q8NBU5 361 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 ATRIPQ8WXE1 791 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 FAM3CQ92520 227 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 PSMG2Q969U7 264 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 HVCN1Q96D96 273 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 INTS4Q96HW7 963 aaKnown RBP11.26□□□□□ -0.61
VPS4B-207ENST00000591519 EPSTI1Q96J88 318 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 CHRDQ9H2X0 955 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 PRMT8Q9NR22 394 aaPredicted RBP11.26□□□□□ -0.61
VPS4B-207ENST00000591519 STK17AQ9UEE5 414 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 DSEQ9UL01 958 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 MORC2Q9Y6X9 1032 aaPredicted RBP11.26□□□□□ -0.61
VPS4B-207ENST00000591519 HEPACAM2A8MVW5 462 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 ZNF263O14978 683 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 CHADO15335 359 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 ACTN4O43707 911 aaKnown RBP11.25□□□□□ -0.61
VPS4B-207ENST00000591519 TBCAO75347 108 aaKnown RBP11.25□□□□□ -0.61
VPS4B-207ENST00000591519 FGF19O95750 216 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 NFICP08651 508 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 ODC1P11926 461 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 ADSSP30520 456 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 SLC19A1P41440 591 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 TUFMP49411 452 aaKnown RBP11.25□□□□□ -0.61
VPS4B-207ENST00000591519 ACOT2P49753 483 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 SMARCB1Q12824 385 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 MTAPQ13126 283 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 TMEM132DQ14C87 1099 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 POSTNQ15063 836 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 KMT5BQ4FZB7 885 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 ADALQ6DHV7 355 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 FAM173BQ6P4H8 233 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 C1orf228Q6PIY5 440 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 USP49Q70CQ1 688 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 GAREM2Q75VX8 874 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 NT5DC4Q86YG4 428 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 OR10T2Q8NGX3 314 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 MSANTD3Q96H12 275 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 TMEM209Q96SK2 561 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 MKNK1Q9BUB5 465 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 ZCWPW1Q9H0M4 648 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 ZHX3Q9H4I2 956 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 OBP2AQ9NY56 170 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 SEL1LQ9UBV2 794 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 AGO2Q9UKV8 859 aaKnown RBP11.25□□□□□ -0.61
VPS4B-207ENST00000591519 SLC27A5Q9Y2P5 690 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 SRPRBQ9Y5M8 271 aaKnown RBP11.25□□□□□ -0.61
VPS4B-207ENST00000591519 CLIC4Q9Y696 253 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 SCN1AP35498 2009 aa11.25□□□□□ -0.61
VPS4B-207ENST00000591519 COL4A2P08572 1712 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 ANK1P16157 1881 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 A0A1W2PRU2 124 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 STX6O43752 255 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 CHRNB1P11230 501 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 TDGF1P13385 188 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 NRLP54845 237 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 CEBPZQ03701 1054 aaKnown RBP11.24□□□□□ -0.61
VPS4B-207ENST00000591519 RESTQ13127 1097 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 FOXD4L6Q3SYB3 417 aaPredicted RBP11.24□□□□□ -0.61
VPS4B-207ENST00000591519 FOXD4L3Q6VB84 417 aaPredicted RBP11.24□□□□□ -0.61
VPS4B-207ENST00000591519 ITIH5Q86UX2 942 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 ARID3BQ8IVW6 561 aaPredicted RBP11.24□□□□□ -0.61
VPS4B-207ENST00000591519 DCLK2Q8N568 766 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 GPR161Q8N6U8 529 aaKnown RBP11.24□□□□□ -0.61
VPS4B-207ENST00000591519 RASSF8Q8NHQ8 419 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 C2orf15Q8WU43 125 aaKnown RBP11.24□□□□□ -0.61
VPS4B-207ENST00000591519 DNAJC19Q96DA6 116 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 RSPRY1Q96DX4 576 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 LRRC3BQ96PB8 259 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 EPC1Q9H2F5 836 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 LMAN1LQ9HAT1 526 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 DPP3Q9NY33 737 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 CCDC39Q9UFE4 941 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 FBXO2Q9UK22 296 aaPredicted RBP11.24□□□□□ -0.61
VPS4B-207ENST00000591519 MTMR6Q9Y217 621 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 PIAS3Q9Y6X2 628 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 NCANO14594 1321 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 GPR179Q6PRD1 2367 aa11.24□□□□□ -0.61
VPS4B-207ENST00000591519 MYMKA6NI61 221 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 KPNA7A9QM74 516 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 TISP43B9A030 160 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 CYB561D2O14569 222 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 IL18RAPO95256 599 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 GAP43P17677 238 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 TAF6P49848 677 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 ARHGAP29Q52LW3 1261 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 RRAGBQ5VZM2 374 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 DYMQ7RTS9 669 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 LRRTM3Q86VH5 581 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 METTL23Q86XA0 190 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 SFR1Q86XK3 245 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 KIAA2013Q8IYS2 634 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 THEM5Q8N1Q8 247 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 TTC9BQ8N6N2 239 aa11.23□□□□□ -0.61
VPS4B-207ENST00000591519 POMGNT1Q8WZA1 660 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms